RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 TWIST2Q8WVJ9 160 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 NCLNQ969V3 563 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 PPWD1Q96BP3 646 aaKnown RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 TLCD1Q96CP7 247 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 SENP5Q96HI0 755 aaPredicted RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 UTP23Q9BRU9 249 aaKnown RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 OR8D2Q9GZM6 311 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 RNF32Q9H0A6 362 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 ACBD3Q9H3P7 528 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 VIPAS39Q9H9C1 493 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 LRTM1Q9HBL6 345 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 C1orf109Q9NX04 203 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 TEX10Q9NXF1 929 aaPredicted RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 PLA2G3Q9NZ20 509 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 ZDHHC2Q9UIJ5 367 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 DLGAP4Q9Y2H0 992 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.77□□□□□ -1.33
GYPB-206ENST00000506516 TMED5Q9Y3A6 229 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 CLDN16Q9Y5I7 305 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 DNAJC15Q9Y5T4 150 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 SCN3AQ9NY46 2000 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 BSNQ9UPA5 3926 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 PCSK5Q92824 1860 aa6.77□□□□□ -1.33
GYPB-206ENST00000506516 TRAV17A0A0B4J275 112 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 TRBV11-1A0A0K0K1C0 115 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 OR5H15A6NDH6 313 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 WASHC1A8K0Z3 465 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 GABRR3A8MPY1 467 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 NPIPB8E9PQR5 432 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 WDPCPO95876 746 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 IL3P08700 152 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 DDX5P17844 614 aaKnown RBP6.76□□□□□ -1.33
GYPB-206ENST00000506516 NT5EP21589 574 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 BGNP21810 368 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 CD96P40200 585 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 CD97P48960 835 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 CYB561P49447 251 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 TNFSF10P50591 281 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 RPL14P50914 215 aaKnown RBP6.76□□□□□ -1.33
GYPB-206ENST00000506516 MLF1P58340 268 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 RAE1P78406 368 aaKnown RBP6.76□□□□□ -1.33
GYPB-206ENST00000506516 OC90Q02509 493 aaPredicted RBP6.76□□□□□ -1.33
GYPB-206ENST00000506516 PLAURQ03405 335 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 ZNF763Q0D2J5 394 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 MPP2Q14168 576 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 ZNF267Q14586 743 aaPredicted RBP6.76□□□□□ -1.33
GYPB-206ENST00000506516 ZNF169Q14929 603 aaPredicted RBP6.76□□□□□ -1.33
GYPB-206ENST00000506516 KIAA0040Q15053 153 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 SPRED3Q2MJR0 410 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 UGT3A2Q3SY77 523 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 ATG16L1Q676U5 607 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 FCRLBQ6BAA4 426 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 RPUSD3Q6P087 351 aaKnown RBP6.76□□□□□ -1.33
GYPB-206ENST00000506516 Q6ZSR9 355 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 BEST3Q8N1M1 668 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 TMEM156Q8N614 296 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 AMER2Q8N7J2 671 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 CATSPER1Q8NEC5 780 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 OR8K3Q8NH51 312 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 SLC2A12Q8TD20 617 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 MGARPQ8TDB4 240 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 UCN3Q969E3 161 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 KLHL29Q96CT2 875 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 C11orf24Q96F05 449 aaPredicted RBP6.76□□□□□ -1.33
GYPB-206ENST00000506516 FBXL20Q96IG2 436 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 ATP6V1G3Q96LB4 118 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 PPP3R2Q96LZ3 170 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 EBPLQ9BY08 206 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 TUBB1Q9H4B7 451 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 TNFRSF12AQ9NP84 129 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 GIMAP4Q9NUV9 329 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 EHD3Q9NZN3 535 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 UTS2RQ9UKP6 389 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 CES1P1Q9UKY3 287 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 YARS2Q9Y2Z4 477 aaKnown RBP6.76□□□□□ -1.33
GYPB-206ENST00000506516 RAP2CQ9Y3L5 183 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 CCL27Q9Y4X3 112 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 COPG1Q9Y678 874 aaKnown RBP6.76□□□□□ -1.33
GYPB-206ENST00000506516 FER1L5A0AVI2 2057 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 KALRNO60229 2985 aa6.76□□□□□ -1.33
GYPB-206ENST00000506516 OR6C76A6NM76 312 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 HMGB1P1B2RPK0 211 aaPredicted RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 PIP5K1BO14986 540 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 LSM1O15116 133 aaKnown RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 ITM2AO43736 263 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 PRAMEF2O60811 474 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 PEX11AO75192 247 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 VPS4BO75351 444 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 ITGA10O75578 1167 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 LYPLA1O75608 230 aaPredicted RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 DDAH2O95865 285 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 F10P00742 488 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 ARAFP10398 606 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 CPMP14384 443 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 DDCP20711 480 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 ADH6P28332 368 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 MPIP34949 423 aa6.75□□□□□ -1.33
GYPB-206ENST00000506516 TRHRP34981 398 aaPredicted RBP6.75□□□□□ -1.33
GYPB-206ENST00000506516 FEN1P39748 380 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms