RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 TGM3Q08188 693 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ZNF267Q14586 743 aaPredicted RBP8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ZNF460Q14592 562 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 TSNQ15631 228 aaKnown RBP8.39□□□□□ -1.07
PTPN20-216ENST00000506080 NTRK2Q16620 822 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 SPANXN3Q5MJ09 141 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 WIPI1Q5MNZ9 446 aaPredicted RBP8.39□□□□□ -1.07
PTPN20-216ENST00000506080 TEDDM1Q5T9Z0 273 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 PRAMEF9Q5VWM5 478 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 PLXDC2Q6UX71 529 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 FRA10AC1Q70Z53 315 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 SLC29A4Q7RTT9 530 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 CNTN4Q8IWV2 1026 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ACOT4Q8N9L9 421 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 SLC44A1Q8WWI5 657 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 SMPDL3BQ92485 455 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ABTB1Q969K4 478 aaPredicted RBP8.39□□□□□ -1.07
PTPN20-216ENST00000506080 PIGTQ969N2 578 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ISL2Q96A47 359 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 MAGOHBQ96A72 148 aaKnown RBP8.39□□□□□ -1.07
PTPN20-216ENST00000506080 RHBDF1Q96CC6 855 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 CERS2Q96G23 380 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 PDLIM5Q96HC4 596 aaKnown RBP8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ART5Q96L15 291 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 GNRHR2Q96P88 292 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 KCNC2Q96PR1 638 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 CCL19Q99731 98 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 PIP5K1AQ99755 562 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ERVK-6Q9BXR3 956 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 WWTR1Q9GZV5 400 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 CALHM2Q9HA72 323 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 UBTD1Q9HAC8 227 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 ERVK-19Q9WJR5 959 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 OARD1Q9Y530 152 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 SPACA6W5XKT8 324 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 HIVEP2P31629 2446 aa8.39□□□□□ -1.07
PTPN20-216ENST00000506080 PRKRAO75569 313 aaKnown RBP8.38□□□□□ -1.07
PTPN20-216ENST00000506080 HPNP05981 417 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 CD22P20273 847 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 CPOXP36551 454 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 MASP1P48740 699 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 FBXW4P57775 412 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 IGLV3-21P80748 117 aaPredicted RBP8.38□□□□□ -1.07
PTPN20-216ENST00000506080 DOC2AQ14183 400 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 RCAN2Q14206 197 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 FNDC7Q5VTL7 733 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 PRSS57Q6UWY2 283 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 RNF111Q6ZNA4 994 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 IGDCC3Q8IVU1 814 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 DND1Q8IYX4 353 aaKnown RBP8.38□□□□□ -1.07
PTPN20-216ENST00000506080 GCNT2Q8N0V5 402 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 NKAPQ8N5F7 415 aaKnown RBP8.38□□□□□ -1.07
PTPN20-216ENST00000506080 SNX31Q8N9S9 440 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 BBOF1Q8ND07 529 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 ANKRD49Q8WVL7 239 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 ESAMQ96AP7 390 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 INTS12Q96CB8 462 aaKnown RBP8.38□□□□□ -1.07
PTPN20-216ENST00000506080 RBM18Q96H35 190 aaKnown RBP8.38□□□□□ -1.07
PTPN20-216ENST00000506080 FBXL20Q96IG2 436 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 RILPQ96NA2 401 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 KRT12Q99456 494 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 TMEM79Q9BSE2 394 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 ROGDIQ9GZN7 287 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 PITHD1Q9GZP4 211 aaPredicted RBP8.38□□□□□ -1.07
PTPN20-216ENST00000506080 UBQLN3Q9H347 655 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.38□□□□□ -1.07
PTPN20-216ENST00000506080 GPRC5BQ9NZH0 403 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 CTNNAL1Q9UBT7 734 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 NDRG3Q9UGV2 375 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 C15orf41Q9Y2V0 281 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 ARID1AO14497 2285 aa8.38□□□□□ -1.07
PTPN20-216ENST00000506080 SAP18O00422 153 aaKnown RBP8.37□□□□□ -1.07
PTPN20-216ENST00000506080 TP53I11O14683 189 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 TTC4O95801 387 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 TGFB1P01137 390 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 CYP4B1P13584 511 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 NID1P14543 1247 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 ALOX15P16050 662 aaPredicted RBP8.37□□□□□ -1.07
PTPN20-216ENST00000506080 HIST1H1TP22492 207 aaPredicted RBP8.37□□□□□ -1.07
PTPN20-216ENST00000506080 SSR2P43308 183 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 HSPA7P48741 367 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 NAGLUP54802 743 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 PLIN5Q00G26 463 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 SRYQ05066 204 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 SLAMF1Q13291 335 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 EBPQ15125 230 aaKnown RBP8.37□□□□□ -1.07
PTPN20-216ENST00000506080 RPS6KA2Q15349 733 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 ACKR1Q16570 336 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 AP5B1Q2VPB7 878 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 NHSL2Q5HYW2 709 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 HP1BP3Q5SSJ5 553 aaPredicted RBP8.37□□□□□ -1.07
PTPN20-216ENST00000506080 C18orf63Q68DL7 685 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 TRMT10BQ6PF06 316 aaKnown RBP8.37□□□□□ -1.07
PTPN20-216ENST00000506080 CCDC137Q6PK04 289 aaKnown RBP8.37□□□□□ -1.07
PTPN20-216ENST00000506080 GALNT7Q86SF2 657 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 ADAMTSL2Q86TH1 951 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 YRDCQ86U90 279 aaKnown RBP8.37□□□□□ -1.07
PTPN20-216ENST00000506080 PPIL6Q8IXY8 311 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 TAGAPQ8N103 731 aa8.37□□□□□ -1.07
PTPN20-216ENST00000506080 SPC24Q8NBT2 197 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms