RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 P2RY2P41231 377 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 CRYBB2P43320 205 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 VEGFBP49765 207 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 RORCP51449 518 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 RHAGQ02094 409 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 KRR1Q13601 381 aaKnown RBP7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 ZNF234Q14588 700 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 TOR1AIP1Q5JTV8 583 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 FAM46CQ5VWP2 391 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 TMEM53Q6P2H8 277 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 FAM92BQ6ZTR7 304 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 USP30Q70CQ3 517 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 ERN2Q76MJ5 926 aaKnown RBP7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 SPRED2Q7Z698 418 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 UBE3DQ7Z6J8 389 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 NUDT13Q86X67 352 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 KRT73Q86Y46 540 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 LAX1Q8IWV1 398 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 NANOGP1Q8N7R0 232 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 PIK3R3Q92569 461 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 LRR1Q96L50 414 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC6A18Q96N87 628 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 QRFPRQ96P65 431 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 DPH7Q9BTV6 452 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 PRR14Q9BWN1 585 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 OSGEPL1Q9H4B0 414 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 XKR8Q9H6D3 395 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 SIAEQ9HAT2 523 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 SMURF1Q9HCE7 757 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 ZCCHC3Q9NUD5 404 aaKnown RBP7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 P2RX2Q9UBL9 471 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 MUTYHQ9UIF7 546 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 A4GNTQ9UNA3 340 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 KLHL20Q9Y2M5 609 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 LSM2Q9Y333 95 aaKnown RBP7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 OR1A2Q9Y585 309 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 LRRK1Q38SD2 2015 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 NOTCH4Q99466 2003 aa7.21□□□□□ -1.26
PPARGC1A-204ENST00000506055 SMIM30A4D0T7 59 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 CCNKO75909 580 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLITRK5O94991 958 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 SEMA3DO95025 777 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 PCDH8O95206 1070 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC35G4P0C7Q5 338 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 MMP11P24347 488 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 PPP2R1BP30154 601 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 RCVRNP35243 200 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 TIE1P35590 1138 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 ETV5P41161 510 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 ETV6P41212 452 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 CASP3P42574 277 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 SSR2P43308 183 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 ETV1P50549 477 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 NCBP2P52298 156 aaKnown RBP eCLIP7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 HTRA3P83110 453 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 RUNX1T1Q06455 604 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 C1DQ13901 141 aaKnown RBP7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 GINS1Q14691 196 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 SF3B4Q15427 424 aaKnown RBP eCLIP7.2□□□□□ -1.262e-8■■■■■ 28
PPARGC1A-204ENST00000506055 GPR19Q15760 415 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 ZNF750Q32MQ0 723 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 MFSD4BQ5TF39 518 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 MEDAGQ5VYS4 303 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 METRNLQ641Q3 311 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 C12orf73Q69YU5 71 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 OR4C11Q6IEV9 310 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 ACSM5Q6NUN0 579 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 NRARPQ7Z6K4 114 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 ZER1Q7Z7L7 766 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 LRRTM4Q86VH4 590 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 IQCHQ86VS3 1027 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 Q8N9G6 341 aaPredicted RBP7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 SCAIQ8N9R8 606 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 LINC01555Q8NAE3 123 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 FLCNQ8NFG4 579 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 IL17RDQ8NFM7 739 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 OR4K5Q8NGD3 323 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 WFIKKN2Q8TEU8 576 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 RASSF5Q8WWW0 418 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC35B4Q969S0 331 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC35G5Q96KT7 338 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 FERD3LQ96RJ6 166 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 GPA33Q99795 319 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 QRSL1Q9H0R6 528 aaKnown RBP7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 GLIPR2Q9H4G4 154 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 KLHL31Q9H511 634 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 MARCH7Q9H992 704 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 PELI2Q9HAT8 420 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 FBXL12Q9NXK8 326 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 CXXC1Q9P0U4 656 aaPredicted RBP7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 STUB1Q9UNE7 303 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 SSR3Q9UNL2 185 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 CARD8Q9Y2G2 431 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 SLC27A6Q9Y2P4 619 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 INSL6Q9Y581 213 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 MTCL1Q9Y4B5 1905 aaKnown RBP7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 CHD9Q3L8U1 2897 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 REV3LO60673 3130 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 TBC1D3BA6NDS4 549 aa7.2□□□□□ -1.26
PPARGC1A-204ENST00000506055 PLD2O14939 933 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms