RNA–Protein interactions for RNA: ENST00000505676.5

TRAPPC11-204, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best)

Gene TRAPPC11, Length 2,244 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-204ENST00000505676 FZD2Q14332 565 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 LAPTM4AQ15012 233 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 DUSP7Q16829 419 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 ATAD3BQ5T9A4 648 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 FCRL6Q6DN72 434 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 LAIR2Q6ISS4 152 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 KLHL35Q6PF15 583 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 IQCHQ86VS3 1027 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 LRRC25Q8N386 305 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 SLC5A8Q8N695 610 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 RAB2BQ8WUD1 216 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 JPH3Q8WXH2 748 aaPredicted RBP16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 PRO3102Q9H379 93 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 SERHL2Q9H4I8 314 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 PLCXD1Q9NUJ7 323 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 MGAT4BQ9UQ53 548 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 PRAMEF25A6NGN4 478 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 TRIM64BA6NI03 449 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 FAAHO00519 579 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 MAPK11Q15759 364 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 NEDD8Q15843 81 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 XAF1Q6GPH4 301 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 NIPAL1Q6NVV3 410 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 ARMC6Q6NXE6 501 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 SZRD1Q7Z422 152 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 TAF8Q7Z7C8 310 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 BPIFB6Q8NFQ5 453 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 OR4K14Q8NGD5 310 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 XAGE5Q8WWM1 108 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 RAB8BQ92930 207 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 MUL1Q969V5 352 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 ELP4Q96EB1 424 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 COL21A1Q96P44 957 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 ALPK1Q96QP1 1244 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 UCK1Q9HA47 277 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 FANCEQ9HB96 536 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 PTGFRNQ9P2B2 879 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 DUSP12Q9UNI6 340 aa16.29■□□□□ 0.2
TRAPPC11-204ENST00000505676 MYO10Q9HD67 2058 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 ALOX12P18054 663 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 CBLP22681 906 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 SLC35A2P78381 396 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 SMAD2Q15796 467 aaKnown RBP16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 C18orf63Q68DL7 685 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 FAM180BQ6P0A1 224 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 B3GNT8Q7Z7M8 397 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 P3H2Q8IVL5 708 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 CCDC116Q8IYX3 515 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 KCT2Q8NC54 265 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 GPR32P1Q8NGA4 272 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 OR10G6Q8NH81 332 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 C10orf90Q96M02 699 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 TRNT1Q96Q11 434 aaKnown RBP16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 GPR174Q9BXC1 333 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 PINK1Q9BXM7 581 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 ACTRT3Q9BYD9 372 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 SNX11Q9Y5W9 270 aa16.28■□□□□ 0.2
TRAPPC11-204ENST00000505676 A0A1W2PPC1 479 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 SOX30O94993 753 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 CYP4B1P13584 511 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 PUM1Q14671 1186 aaKnown RBP eCLIP16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 RPS26P11Q5JNZ5 115 aaPredicted RBP16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 GTF2IRD2BQ6EKJ0 949 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 USP53Q70EK8 1073 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 GTF2IRD2Q86UP8 949 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 ZNF687Q8N1G0 1237 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 NUP43Q8NFH3 380 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 SLC37A2Q8TED4 501 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 FCGR1BQ92637 280 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 MS4A4EQ96PG1 132 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 KCMF1Q9P0J7 381 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 DAPP1Q9UN19 280 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 KLHL20Q9Y2M5 609 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 PCDHGA6Q9Y5G7 932 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 SLC22A7Q9Y694 548 aa16.27■□□□□ 0.2
TRAPPC11-204ENST00000505676 OR5K3A6NET4 321 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 CTSVO60911 334 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 RECKO95980 971 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 HMGN2P05204 90 aaKnown RBP16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 H1F0P07305 194 aaKnown RBP16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 TNFRSF1BP20333 461 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 AGXTP21549 392 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 SKP1P63208 163 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 NDUFA9Q16795 377 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 Q6ZS52 159 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 PRSS48Q7RTY5 328 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 SLC44A2Q8IWA5 706 aaPredicted RBP16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 SDR16C5Q8N3Y7 309 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 CNIH3Q8TBE1 160 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 C12orf43Q96C57 262 aaKnown RBP16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 MACROD1Q9BQ69 325 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 HRASLS2Q9NWW9 162 aa16.27■□□□□ 0.19
TRAPPC11-204ENST00000505676 TRBV23OR9-2A0A075B6M9 112 aa16.26■□□□□ 0.19
TRAPPC11-204ENST00000505676 A0A0J9YVX5 310 aa16.26■□□□□ 0.19
TRAPPC11-204ENST00000505676 GLOD5A6NK44 160 aa16.26■□□□□ 0.19
TRAPPC11-204ENST00000505676 B4GAT1O43505 415 aa16.26■□□□□ 0.19
TRAPPC11-204ENST00000505676 CD72P21854 359 aa16.26■□□□□ 0.19
TRAPPC11-204ENST00000505676 LIM2P55344 173 aa16.26■□□□□ 0.19
TRAPPC11-204ENST00000505676 LASP1Q14847 261 aaKnown RBP16.26■□□□□ 0.19
TRAPPC11-204ENST00000505676 TMEM31Q5JXX7 168 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms