RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 SLC25A47Q6Q0C1 308 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 P4HA3Q7Z4N8 544 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 LHFPL4Q7Z7J7 247 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 RANBP3LQ86VV4 465 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 GVQW1Q8N7I0 195 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 POC1AQ8NBT0 407 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 ADAD2Q8NCV1 583 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR52K2Q8NGK3 314 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 TRMT10AQ8TBZ6 339 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 PNPT1Q8TCS8 783 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 RNF139Q8WU17 664 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 TM9SF4Q92544 642 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 PNPLA2Q96AD5 504 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 MED30Q96HR3 178 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 INPP4AQ96PE3 977 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 UHRF2Q96PU4 802 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 PSKH2Q96QS6 385 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 SECISBP2Q96T21 854 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 PLIN2Q99541 437 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 CAPS2Q9BXY5 557 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 FNDC4Q9H6D8 234 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 C6orf106Q9H6K1 298 aaPredicted RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 KAT8Q9H7Z6 458 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 TRPV5Q9NQA5 729 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 MAN2C1Q9NTJ4 1040 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 TAAR2Q9P1P5 351 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 RNF14Q9UBS8 474 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 PLCL2Q9UPR0 1127 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 MRPS33Q9Y291 106 aaKnown RBP3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLC6A5Q9Y345 797 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 SPACA6W5XKT8 324 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 TTC3P53804 2025 aa3.4□□□□□ -1.87
TRAPPC13-208ENST00000505553 A0A0G2JLW4 131 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 IQCMA0A1B0GVH7 501 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 XKRY2A2RUG3 117 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 GSAPA4D1B5 854 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 CTAGE15A4D2H0 777 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 PPIAL4DF5H284 164 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 TSPAN2O60636 221 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 SURF6O75683 361 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 ANXA9O76027 345 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 UFL1O94874 794 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 ANGPTL1O95841 491 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 HPRP00739 348 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 NGFP01138 241 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 MT-ND1P03886 318 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 NGFRP08138 427 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 C4BPBP20851 252 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 PEX19P40855 299 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 RGS4P49798 205 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 ATP5IP56385 69 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 RPS4XP62701 263 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 SRYQ05066 204 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 EFTUD2Q15029 972 aaKnown RBP eCLIP3.39□□□□□ -1.871e-6■■■■■ 35.8
TRAPPC13-208ENST00000505553 TEAD2Q15562 447 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 TAB1Q15750 504 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 HAGHQ16775 308 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 C9orf57Q5W0N0 161 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 SEL1L3Q68CR1 1132 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 NADSYN1Q6IA69 706 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 TRIM65Q6PJ69 517 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZYG11AQ6WRX3 759 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 RBMS3Q6XE24 437 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 Q71RC1 249 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 CTAGE6Q86UF2 777 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 ITIH5Q86UX2 942 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 LUZP1Q86V48 1076 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 WDR49Q8IV35 697 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 CDH26Q8IXH8 852 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 DND1Q8IYX4 353 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLC22A15Q8IZD6 547 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 LSMEM2Q8N112 164 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 STPG4Q8N801 248 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 ICA1LQ8NDH6 482 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 OR10G8Q8NGN5 311 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 GATAD1Q8WUU5 269 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 MRPL24Q96A35 216 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 SLC25A36Q96CQ1 311 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 DHTKD1Q96HY7 919 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 TPD52L3Q96J77 140 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 ZNF479Q96JC4 524 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 GSDMCQ9BYG8 508 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 GCOM2Q9BZD3 368 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 CRNKL1Q9BZJ0 848 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 DCTPP1Q9H773 170 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 SIX2Q9NPC8 291 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 AGPAT5Q9NUQ2 364 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 RBM28Q9NW13 759 aaKnown RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 TEX10Q9NXF1 929 aaPredicted RBP3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 TUBGCP4Q9UGJ1 667 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 FKBP7Q9Y680 259 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 RNF215Q9Y6U7 377 aa3.39□□□□□ -1.87
TRAPPC13-208ENST00000505553 NEDD4P46934 1319 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 PCP4L1A6NKN8 68 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 LACTBL1A8MY62 500 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 SDHDO14521 159 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 SURF4O15260 269 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 SIGLEC5O15389 551 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 DCXO43602 365 aa3.38□□□□□ -1.87
TRAPPC13-208ENST00000505553 CIDEAO60543 219 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms