RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 BARD1Q99728 777 aaKnown RBP16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 LRFN1Q9P244 771 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 CPAMD8Q8IZJ3 1885 aa16.92■□□□□ 0.3
PDLIM7-209ENST00000503346 OR6C76A6NM76 312 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 CT62P0C5K7 136 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 TACR1P25103 407 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 CYB561P49447 251 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 ST13P50502 369 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 SLC37A1P57057 533 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 RPL38P63173 70 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 DUSP2Q05923 314 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 MGAT2Q10469 447 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 MAP4K2Q12851 820 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 PRICKLE4Q2TBC4 344 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 TTMPQ5BVD1 217 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF766Q5HY98 468 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 SPINK14Q6IE38 97 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 RNF111Q6ZNA4 994 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 C16orf47Q6ZP98 133 aaPredicted RBP16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 RAB3IL1Q8TBN0 382 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 C19orf60Q96EN9 201 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 SCMH1Q96GD3 660 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 C3orf30Q96M34 536 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 LIN28AQ9H9Z2 209 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 PFDN4Q9NQP4 134 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 SLC35C2Q9NQQ7 365 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 TAS2R7Q9NYW3 318 aa16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 EXO1Q9UQ84 846 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 COPG1Q9Y678 874 aaKnown RBP16.91■□□□□ 0.3
PDLIM7-209ENST00000503346 WWP2O00308 870 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 SKAP2O75563 359 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 OR2J2O76002 312 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 CD46P15529 392 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 SDC1P18827 310 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 S1PR1P21453 382 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 RPL14P50914 215 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 SSR4P51571 173 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 MPEG1Q2M385 716 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 GALNTL6Q49A17 601 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 C6orf163Q5TEZ5 329 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 FAM180BQ6P0A1 224 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF227Q86WZ6 799 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 TICAM1Q8IUC6 712 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 GPALPP1Q8IXQ4 340 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 VWA5B2Q8N398 1253 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 TMEM156Q8N614 296 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF615Q8N8J6 731 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 OR7G1Q8NGA0 311 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 CDC26Q8NHZ8 85 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 EXOSC8Q96B26 276 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 CTHRC1Q96CG8 243 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF764Q96H86 408 aaPredicted RBP16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 EGLN2Q96KS0 407 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 RASL10BQ96S79 203 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 MIEF1Q9NQG6 463 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 RYDENQ9NUL5 291 aaKnown RBP16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 GIMAP4Q9NUV9 329 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 MAT2BQ9NZL9 334 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 ZNF639Q9UID6 485 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 ENTPD4Q9Y227 616 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 NTNG1Q9Y2I2 539 aa16.9■□□□□ 0.3
PDLIM7-209ENST00000503346 ATP6AP2A0A1C7CYW4 349 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 PEX11AO75192 247 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 SNNO75324 88 aaPredicted RBP16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 ATP6AP2O75787 350 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 SP1P08047 785 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 SSTR4P31391 388 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 SOX18P35713 384 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 EBPQ15125 230 aaKnown RBP16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 IGFBP7Q16270 282 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 ATP6AP1LQ52LC2 224 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 PIGGQ5H8A4 983 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 C6orf136Q5SQH8 315 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 SLC25A25Q6KCM7 469 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 SLC29A4Q7RTT9 530 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 TRIM42Q8IWZ5 723 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 CCDC116Q8IYX3 515 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 ZNF675Q8TD23 568 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 C5orf34Q96MH7 638 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 BRINP2Q9C0B6 783 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 WWTR1Q9GZV5 400 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 OR10A5Q9H207 317 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 ASF1BQ9NVP2 202 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 THAP1Q9NVV9 213 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 GIMAP2Q9UG22 337 aa16.89■□□□□ 0.29
PDLIM7-209ENST00000503346 MYO1GB0I1T2 1018 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 HMGB1P1B2RPK0 211 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 SLC25A12O75746 678 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 SASH3O75995 380 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 JUNP05412 331 aaKnown RBP16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 BCKDHAP12694 445 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 MAPK1P28482 360 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 LTB4RQ15722 352 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 PDCD2Q16342 344 aaPredicted RBP16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 PRSS53Q2L4Q9 553 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 ZNF628Q5EBL2 1059 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 ATG16L1Q676U5 607 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 FAM111BQ6SJ93 734 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 CYP4Z2PQ8N1L4 340 aa16.88■□□□□ 0.29
PDLIM7-209ENST00000503346 GOLGA6L1Q8N7Z2 621 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms