RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SPPL2AQ8TCT8 520 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 PYROXD1Q8WU10 500 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 SMPDL3BQ92485 455 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 RIT1Q92963 219 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ADIPOR1Q96A54 375 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 DTNBP1Q96EV8 351 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF597Q96LX8 424 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 DACH2Q96NX9 599 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ERP44Q9BS26 406 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 LRRC1Q9BTT6 524 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 DOHHQ9BU89 302 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ACBD3Q9H3P7 528 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 LIN28AQ9H9Z2 209 aaKnown RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 WDR41Q9HAD4 459 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CXorf21Q9HAI6 301 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 DMRT3Q9NQL9 472 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CCM2LQ9NUG4 571 aaPredicted RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CD274Q9NZQ7 290 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CRIM1Q9NZV1 1036 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 OPTCQ9UBM4 332 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CBLCQ9ULV8 474 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 RNF112Q9ULX5 631 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 CFL2Q9Y281 166 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 C15orf41Q9Y2V0 281 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 ACOT9Q9Y305 439 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 MRPS18CQ9Y3D5 142 aaKnown RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 TNPO3Q9Y5L0 923 aaKnown RBP5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 SAR1BQ9Y6B6 198 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 MTORP42345 2549 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 MPDZO75970 2070 aa5.6□□□□□ -1.51
LSM3P4-201ENST00000502948 C2orf92A0A1B0GVN3 265 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 FAM187AA6NFU0 413 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 TUBAL3A6NHL2 446 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 FAM171A2A8MVW0 826 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 RTCAO00442 366 aaKnown RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ACOX3O15254 700 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 PHGDHO43175 533 aaKnown RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 CCNT2O60583 730 aaKnown RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ATE1O95260 518 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 TGFB1P01137 390 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 LTA4HP09960 611 aaKnown RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 CTSSP25774 331 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 SSTR1P30872 391 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 HOXC12P31275 282 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 CASP3P42574 277 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 PAFAH1B1P43034 410 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF136P52737 540 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ALDH18A1P54886 795 aaKnown RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 HNRNPH2P55795 449 aaKnown RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 DCAF7P61962 342 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 HERVK_113P63132 956 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ERVK-8P63133 956 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ADAM8P78325 824 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 OCRLQ01968 901 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 CALCOCO2Q13137 446 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 GAB1Q13480 694 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 SETDB1Q15047 1291 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 DEFB113Q30KQ7 82 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 GGTA1PQ4G0N0 100 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 HP1BP3Q5SSJ5 553 aaPredicted RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 SHEQ5VZ18 495 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 TIGD3Q6B0B8 471 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 OR52E8Q6IFG1 317 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 SLC30A6Q6NXT4 461 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 DGAT2L6Q6ZPD8 337 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 C3orf62Q6ZUJ4 267 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 NUP54Q7Z3B4 507 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 WDR53Q7Z5U6 358 aaPredicted RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 TBC1D1Q86TI0 1168 aaPredicted RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ANKMY2Q8IV38 441 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ZZZ3Q8IYH5 903 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ZNF615Q8N8J6 731 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 GBP7Q8N8V2 638 aaPredicted RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 SNX31Q8N9S9 440 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 NAXEQ8NCW5 288 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 TNIP2Q8NFZ5 429 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 OR10G3Q8NGC4 313 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 WDR20Q8TBZ3 569 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 DIO2Q92813 273 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ISL2Q96A47 359 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ESAMQ96AP7 390 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 CTHRC1Q96CG8 243 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ERP27Q96DN0 273 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 PWWP2AQ96N64 755 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 SERPINI1Q99574 410 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 PIP5K1AQ99755 562 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 TM9SF2Q99805 663 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 NTMT1Q9BV86 223 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 SFXN3Q9BWM7 321 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ERVK-6Q9BXR3 956 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 SHCBP1LQ9BZQ2 653 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 OR51B5Q9H339 312 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 EXO5Q9H790 373 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 PLEKHF2Q9H8W4 249 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 BEX4Q9NWD9 120 aaPredicted RBP5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 AHSPQ9NZD4 102 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 TMCO1Q9UM00 188 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ERVK-19Q9WJR5 959 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 NPFFR2Q9Y5X5 522 aa5.59□□□□□ -1.51
LSM3P4-201ENST00000502948 ABCA4P78363 2273 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms