RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ARFGAP2Q8N6H7 521 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 CLHC1Q8NHS4 586 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 HAS2Q92819 552 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 GFM2Q969S9 779 aaKnown RBP23.35■■□□□ 1.33
LSM6-202ENST00000502781 MTERF3Q96E29 417 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 STMN3Q9NZ72 180 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 MAT2BQ9NZL9 334 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 NOP53Q9NZM5 478 aaKnown RBP23.35■■□□□ 1.33
LSM6-202ENST00000502781 COPS7AQ9UBW8 275 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 ZNF639Q9UID6 485 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 ERVK-19Q9WJR5 959 aa23.35■■□□□ 1.33
LSM6-202ENST00000502781 EIF3LQ9Y262 564 aaKnown RBP23.35■■□□□ 1.33
LSM6-202ENST00000502781 DYNC1I1O14576 645 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 KALRNO60229 2985 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 ZFAND5O76080 213 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 LBPP18428 481 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 SLC37A1P57057 533 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 KLRB1Q12918 225 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 PTGR1Q14914 329 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 HSDL2Q6YN16 418 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 ZADH2Q8N4Q0 377 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 ZNF675Q8TD23 568 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 DOK4Q8TEW6 326 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 CNPPD1Q9BV87 410 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 CDCP1Q9H5V8 836 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 GIMAP4Q9NUV9 329 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 ENTPD4Q9Y227 616 aa23.34■■□□□ 1.33
LSM6-202ENST00000502781 CDK2AP1O14519 115 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 WDPCPO95876 746 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 G6PDP11413 515 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 NT5EP21589 574 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 DIO3P55073 304 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 C21orf58P58505 322 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 RNF4P78317 190 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 NFATC3Q12968 1075 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 Q6ZS92 163 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 RIMKLAQ8IXN7 391 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 C9orf40Q8IXQ3 194 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 CCDC116Q8IYX3 515 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 ZNF843Q8N446 348 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 WDR55Q9H6Y2 383 aaPredicted RBP23.33■■□□□ 1.33
LSM6-202ENST00000502781 ATP6V1HQ9UI12 483 aa23.33■■□□□ 1.33
LSM6-202ENST00000502781 CPAMD8Q8IZJ3 1885 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 GABRR3A8MPY1 467 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 AKAP10O43572 662 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 LRATO95237 230 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 EPHA3P29320 983 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 MPIP34949 423 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 LTB4RQ15722 352 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 MPEG1Q2M385 716 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 ZNF385BQ569K4 471 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 ZNF628Q5EBL2 1059 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 FAM111BQ6SJ93 734 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 PTRH1Q86Y79 214 aaKnown RBP23.32■■□□□ 1.32
LSM6-202ENST00000502781 BEST3Q8N1M1 668 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 VWA5B2Q8N398 1253 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 ZNF615Q8N8J6 731 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 NUBPLQ8TB37 319 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 SDAD1Q9NVU7 687 aaKnown RBP eCLIP23.32■■□□□ 1.32
LSM6-202ENST00000502781 CSAG2Q9Y5P2 127 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 USH1CQ9Y6N9 552 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 CFAP46Q8IYW2 2715 aa23.32■■□□□ 1.32
LSM6-202ENST00000502781 CROCCQ5TZA2 2017 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 OR6C76A6NM76 312 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 SCAMP2O15127 329 aaKnown RBP23.31■■□□□ 1.32
LSM6-202ENST00000502781 SSTR4P31391 388 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 FRKP42685 505 aaPredicted RBP23.31■■□□□ 1.32
LSM6-202ENST00000502781 NADK2Q4G0N4 442 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 SLC9B1Q4ZJI4 515 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 R3HCC1LQ7Z5L2 792 aaKnown RBP23.31■■□□□ 1.32
LSM6-202ENST00000502781 TEX19Q8NA77 164 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 ADCY4Q8NFM4 1077 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 OR7G1Q8NGA0 311 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 ACTRT2Q8TDY3 377 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 THAP3Q8WTV1 239 aaPredicted RBP23.31■■□□□ 1.32
LSM6-202ENST00000502781 PPCDCQ96CD2 204 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 BBS4Q96RK4 519 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 SLAMF7Q9NQ25 335 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 PLA2G3Q9NZ20 509 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 MYOTQ9UBF9 498 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 ANAPC2Q9UJX6 822 aa23.31■■□□□ 1.32
LSM6-202ENST00000502781 DYTNA2CJ06 578 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 TGDSO95455 350 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 PRPS1L1P21108 318 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 TRHRP34981 398 aaPredicted RBP23.3■■□□□ 1.32
LSM6-202ENST00000502781 PTGER1P34995 402 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 RPL3P39023 403 aaKnown RBP23.3■■□□□ 1.32
LSM6-202ENST00000502781 CLDN8P56748 225 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 TRMT12Q53H54 448 aaKnown RBP23.3■■□□□ 1.32
LSM6-202ENST00000502781 SLC6A19Q695T7 634 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 ANKRD26P1Q6NSI1 321 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 EPGNQ6UW88 154 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 RNF111Q6ZNA4 994 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 FAM47EQ6ZV65 393 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 OR5L2Q8NGL0 311 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 OR9A2Q8NGT5 310 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 PNPLA2Q96AD5 504 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 ERP27Q96DN0 273 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 AMDHD1Q96NU7 426 aa23.3■■□□□ 1.32
LSM6-202ENST00000502781 BRINP2Q9C0B6 783 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms