RNA–Protein interactions for RNA: ENST00000502422.5

MATR3-202, Transcript of matrin 3, humanhuman

TSL 1 (best)

Gene MATR3, Length 2,250 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-202ENST00000502422 NXF2Q9GZY0 626 aaKnown RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 ILKAPQ9H0C8 392 aaPredicted RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 NTN4Q9HB63 628 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 ANKHQ9HCJ1 492 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 RANGRFQ9HD47 186 aaPredicted RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 SNX15Q9NRS6 342 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 PHPT1Q9NRX4 125 aaPredicted RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 GLTPQ9NZD2 209 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 RCOR3Q9P2K3 495 aaPredicted RBP4.28□□□□□ -1.72
MATR3-202ENST00000502422 CPNE7Q9UBL6 633 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 OR12D3Q9UGF7 316 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 SNX6Q9UNH7 406 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 CDYLQ9Y232 598 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 MFHAS1Q9Y4C4 1052 aa4.28□□□□□ -1.72
MATR3-202ENST00000502422 ZFHX3Q15911 3703 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 ADGRG4Q8IZF6 3080 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 SHANK1Q9Y566 2161 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 ARPC4-TTLL3A0A0A6YYG9 625 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 KRT87PA6NCN2 255 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 TMEM233B4DJY2 109 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 H3BMM5 538 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 I6L893 689 aaPredicted RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 AKR7A2O43488 359 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 TRIM13O60858 407 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 NOS1APO75052 506 aaPredicted RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 PRKD3O94806 890 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 CNOT4O95628 575 aaKnown RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 PSKH1P11801 424 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 IL7P13232 177 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 IFI30P13284 250 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 GFAPP14136 432 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 TGFBR2P37173 567 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 MAP2K4P45985 399 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 RFX2P48378 723 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 IRF9Q00978 393 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 HHEXQ03014 270 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 PRKCDQ05655 676 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 MRPL28Q13084 256 aaKnown RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 STX5Q13190 355 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 SLAMF1Q13291 335 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 PIGHQ14442 188 aaPredicted RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 CHRNA6Q15825 494 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 ZXDCQ2QGD7 858 aaPredicted RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 BCL7AQ4VC05 210 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 FAM102AQ5T9C2 384 aaPredicted RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 GRTP1Q5TC63 336 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 LAMTOR1Q6IAA8 161 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 JMJD6Q6NYC1 403 aaPredicted RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 WDR74Q6RFH5 385 aaPredicted RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 MILR1Q7Z6M3 343 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 TMEM135Q86UB9 458 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 NRROSQ86YC3 692 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 SULF2Q8IWU5 870 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 DMRTC2Q8IXT2 367 aaPredicted RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 WDTC1Q8N5D0 677 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 MCFD2Q8NI22 146 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 THAP4Q8WY91 577 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 SLC7A6Q92536 515 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 CDKL2Q92772 493 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 RNF31Q96EP0 1072 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 TCTN2Q96GX1 697 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 MBOAT4Q96T53 435 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 KRTAP9-4Q9BYQ2 154 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 AMBRA1Q9C0C7 1298 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 IL22Q9GZX6 179 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 ZNF556Q9HAH1 456 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 INTS10Q9NVR2 710 aaKnown RBP4.27□□□□□ -1.73
MATR3-202ENST00000502422 OXSMQ9NWU1 459 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 CMTM6Q9NX76 183 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 B3GNT2Q9NY97 397 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 TAS2R9Q9NYW1 312 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 ABCD2Q9UBJ2 740 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 TMPRSS11EQ9UL52 423 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 PADI1Q9ULC6 663 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 CNTN6Q9UQ52 1028 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 PDE10AQ9Y233 779 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 GRIP1Q9Y3R0 1128 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 ZNF451Q9Y4E5 1061 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 HIVEP3Q5T1R4 2406 aa4.27□□□□□ -1.73
MATR3-202ENST00000502422 LINC00862A6NCI5 91 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ANKUB1A6NFN9 424 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 CCDC154A6NI56 674 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 FXYD1O00168 92 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 MRASO14807 208 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 DSCR3O14972 297 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ARPC2O15144 300 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 INSIG1O15503 277 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 PRSS23O95084 383 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 SNX4O95219 450 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 METTL18O95568 372 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 SLC4A1P02730 911 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 ALPLP05186 524 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 APRTP07741 180 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 CTSBP07858 339 aa4.26□□□□□ -1.73
MATR3-202ENST00000502422 F7P08709 466 aaPredicted RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 HOXD4P09016 255 aaPredicted RBP4.26□□□□□ -1.73
MATR3-202ENST00000502422 HSD17B1P14061 328 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms