RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 CRYBG2Q8N1P7 616 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 HORMAD2Q8N7B1 307 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 ANKFN1Q8N957 763 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 FAM81AQ8TBF8 368 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 ARRDC2Q8TBH0 407 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 GIPC3Q8TF64 312 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 U2AF1L4Q8WU68 220 aaKnown RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 FAM151AQ8WW52 585 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 SMPDL3BQ92485 455 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 RPL3LQ92901 407 aaKnown RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 HAVCR1Q96D42 359 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 GUCD1Q96NT3 240 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 CASD1Q96PB1 797 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 PRMT1Q99873 361 aaKnown RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 UBAC1Q9BSL1 405 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 CHRDL1Q9BU40 450 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 SF3B5Q9BWJ5 86 aaKnown RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 TM2D2Q9BX73 214 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 BBS2Q9BXC9 721 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 TDRD1Q9BXT4 1180 aaKnown RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 PRRG4Q9BZD6 226 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 STRADBQ9C0K7 418 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 RHBGQ9H310 441 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 LZTFL1Q9NQ48 299 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 DDX28Q9NUL7 540 aaKnown RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 RNF186Q9NXI6 227 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 GCNT4Q9P109 453 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 KLHL13Q9P2N7 655 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 P2RX2Q9UBL9 471 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 PEF1Q9UBV8 284 aaKnown RBP3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 B9D1Q9UPM9 204 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 TMED3Q9Y3Q3 217 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 RNF115Q9Y4L5 304 aa3.99□□□□□ -1.77
HMGB1P21-201ENST00000502313 DNAH12Q6ZR08 3092 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 MROH7-TTC4A0A0A0MT08 1334 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZMYM6O95789 1325 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 ARID1BQ8NFD5 2236 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 CEP290O15078 2479 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRAV26-1A0A087WT03 109 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRAV24A0A0B4J272 114 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 OR2M5A3KFT3 312 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 DPPA5A6NC42 116 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 FAM90A26D6RGX4 464 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 E7EWF7 191 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 PPIAL4DF5H284 164 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 F8VVB4 439 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 F8VWA3 439 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TEX46H3BTG2 121 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 SMIM22K7EJ46 135 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 GPAA1O43292 621 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 LCMT2O60294 686 aaKnown RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRIM3O75382 744 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 CLDN7O95471 211 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TGM6O95932 706 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 SFTPBP07988 381 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 CLTAP09496 248 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 ALPIP09923 528 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 EZRP15311 586 aaKnown RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 CYP11B1P15538 503 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 NCK1P16333 377 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 PTNP21246 168 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 GPD1P21695 349 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 CTNNA2P26232 953 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 CHATP28329 748 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 GJB2P29033 226 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 DCTDP32321 178 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TRIM23P36406 574 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 P2RX3P56373 397 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 SEC61GP60059 68 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 RPS15P62841 145 aaKnown RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TPM4P67936 248 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 CSNK2A1P68400 391 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 ZXDBP98169 803 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 MAT1AQ00266 395 aaKnown RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 OTUD4Q01804 1114 aaKnown RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 GABPAQ06546 454 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 IL10RBQ08334 325 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 NCBP1Q09161 790 aaKnown RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 PNRC1Q12796 327 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 DMP1Q13316 513 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 MAB21L1Q13394 359 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 DRP2Q13474 957 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 ENPP2Q13822 863 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 VGLL4Q14135 290 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 HSP90AA4PQ58FG1 418 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLC39A4Q6P5W5 647 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 RBM44Q6ZP01 1051 aaKnown RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 LUZP2Q86TE4 346 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 COMMD2Q86X83 199 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 MAB21L3Q8N8X9 362 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 ASCC1Q8N9N2 400 aaKnown RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 CSNK2A3Q8NEV1 391 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 SLC26A7Q8TE54 656 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 GRHL3Q8TE85 626 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 DDI1Q8WTU0 396 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 TSEN15Q8WW01 171 aaKnown RBP3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 ASZ1Q8WWH4 475 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 PIBF1Q8WXW3 757 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 OR1E3Q8WZA6 343 aa3.98□□□□□ -1.77
HMGB1P21-201ENST00000502313 MCUR1Q96AQ8 359 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms