RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 PMP22Q01453 160 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 ALDH6A1Q02252 535 aaKnown RBP11.86□□□□□ -0.51
HSPG2-213ENST00000498495 SRSF11Q05519 484 aaKnown RBP11.86□□□□□ -0.51
HSPG2-213ENST00000498495 FUT7Q11130 342 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 UBAP2LQ14157 1087 aaKnown RBP11.86□□□□□ -0.51
HSPG2-213ENST00000498495 SH2D4BQ5SQS7 431 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 HLA-DQA1Q5Y7H0 255 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 KANK2Q63ZY3 851 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 ZNF324BQ6AW86 544 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-213ENST00000498495 NOXRED1Q6NXP6 359 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 FAM180BQ6P0A1 224 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 Q6ZSR9 355 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 C9orf40Q8IXQ3 194 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 DDIASQ8IXT1 998 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 CCDC116Q8IYX3 515 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 SAMD14Q8IZD0 417 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-213ENST00000498495 FAM26EQ8N5C1 309 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 SLC22A8Q8TCC7 542 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 EXOSC8Q96B26 276 aaKnown RBP11.86□□□□□ -0.51
HSPG2-213ENST00000498495 GAL3ST4Q96RP7 486 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 SLX1AQ9BQ83 275 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 OR10A5Q9H207 317 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 LRTM1Q9HBL6 345 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 GIMAP4Q9NUV9 329 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 C1orf109Q9NX04 203 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 WBP11Q9Y2W2 641 aaKnown RBP11.86□□□□□ -0.51
HSPG2-213ENST00000498495 KLF13Q9Y2Y9 288 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-213ENST00000498495 CCL27Q9Y4X3 112 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 POLR3HQ9Y535 204 aaPredicted RBP11.86□□□□□ -0.51
HSPG2-213ENST00000498495 DNAJC15Q9Y5T4 150 aa11.86□□□□□ -0.51
HSPG2-213ENST00000498495 ASPDHA6ND91 283 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 BIRC5O15392 142 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 ATP1B1P05026 303 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 PRPH2P23942 346 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 ZNF763Q0D2J5 394 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 MAP4K2Q12851 820 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 KIAA0040Q15053 153 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 PRICKLE4Q2TBC4 344 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 UGT3A2Q3SY77 523 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 FAM111BQ6SJ93 734 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 GFRALQ6UXV0 394 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 RNF165Q6ZSG1 346 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 MDGA2Q7Z553 956 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 SULF2Q8IWU5 870 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 LRRC25Q8N386 305 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-213ENST00000498495 SLC15A4Q8N697 577 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 ADCY4Q8NFM4 1077 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 OR7G1Q8NGA0 311 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 OR6Y1Q8NGX8 325 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 AGR3Q8TD06 166 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 TWIST2Q8WVJ9 160 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 CNRIP1Q96F85 164 aaPredicted RBP11.85□□□□□ -0.51
HSPG2-213ENST00000498495 PKNOX2Q96KN3 472 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 SGCZQ96LD1 299 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 ZNF681Q96N22 645 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 PAIP2Q9BPZ3 127 aaKnown RBP11.85□□□□□ -0.51
HSPG2-213ENST00000498495 WWTR1Q9GZV5 400 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 TUBB1Q9H4B7 451 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 SLC35C2Q9NQQ7 365 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 EHD3Q9NZN3 535 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 SEC14L3Q9UDX4 400 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 BCAP29Q9UHQ4 241 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 ZDHHC2Q9UIJ5 367 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 ENTPD4Q9Y227 616 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 CFL2Q9Y281 166 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 PTGDR2Q9Y5Y4 395 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 SHANK1Q9Y566 2161 aa11.85□□□□□ -0.51
HSPG2-213ENST00000498495 TMEM233B4DJY2 109 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 NPIPB8E9PQR5 432 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 PEX1O43933 1283 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 ZNF354AO60765 605 aaPredicted RBP11.84□□□□□ -0.51
HSPG2-213ENST00000498495 HSPA4LO95757 839 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 CLPSP04118 112 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 DDCP20711 480 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 MST1P26927 711 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 MPIP34949 423 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 MEOX1P50221 254 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 NR0B1P51843 470 aaKnown RBP11.84□□□□□ -0.51
HSPG2-213ENST00000498495 GPR85P60893 370 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 DUSP2Q05923 314 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 MGAT2Q10469 447 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 EBPQ15125 230 aaKnown RBP11.84□□□□□ -0.51
HSPG2-213ENST00000498495 CHI3L2Q15782 390 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 GALNTL6Q49A17 601 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 KRTCAP3Q53RY4 240 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 FAM71E1Q6IPT2 247 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 RTL4Q6ZR62 310 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 TICAM1Q8IUC6 712 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 TAGAPQ8N103 731 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 VWA5B2Q8N398 1253 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 CPSF7Q8N684 471 aaKnown RBP11.84□□□□□ -0.51
HSPG2-213ENST00000498495 ZNF615Q8N8J6 731 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 POGLUT1Q8NBL1 392 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 PSD4Q8NDX1 1056 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 OR2T11Q8NH01 316 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 TP53INP1Q96A56 240 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 FRMD6Q96NE9 622 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 BBS4Q96RK4 519 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 MYNNQ9NPC7 610 aa11.84□□□□□ -0.51
HSPG2-213ENST00000498495 MIEF1Q9NQG6 463 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms