RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 MRM1Q6IN84 353 aaKnown RBP17.07■□□□□ 0.32
PRKCB-209ENST00000498058 GPR180Q86V85 440 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 LCA5Q86VQ0 697 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 OR10Q1Q8NGQ4 319 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 RGMAQ96B86 450 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 ERVK-6Q9BXR3 956 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 ERVK-19Q9WJR5 959 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 ASB4Q9Y574 426 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 SPACA6W5XKT8 324 aa17.07■□□□□ 0.32
PRKCB-209ENST00000498058 A0A096LPK6 155 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 A0A1W2PR48 441 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 GLOD5A6NK44 160 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 PROM1O43490 865 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 SUSD5O60279 629 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 COL6A2P12110 1019 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 ALOX15P16050 662 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-209ENST00000498058 EPB42P16452 691 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 BSGP35613 385 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 MAGEA12P43365 314 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 MAN2A2P49641 1150 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 SNTB1Q13884 538 aaKnown RBP17.06■□□□□ 0.32
PRKCB-209ENST00000498058 SETDB1Q15047 1291 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 FAM83EQ2M2I3 478 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 KLC3Q6P597 504 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 B3GNT6Q6ZMB0 384 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 SEM1Q6ZVN7 128 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 ZCCHC7Q8N3Z6 543 aaKnown RBP17.06■□□□□ 0.32
PRKCB-209ENST00000498058 OR10G3Q8NGC4 313 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 SPACA9Q96E40 222 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-209ENST00000498058 FBXL20Q96IG2 436 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 VPS11Q9H270 941 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 ZNF703Q9H7S9 590 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-209ENST00000498058 PRM3Q9NNZ6 103 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 CNOT11Q9UKZ1 510 aaKnown RBP17.06■□□□□ 0.32
PRKCB-209ENST00000498058 CHCHD2Q9Y6H1 151 aaPredicted RBP17.06■□□□□ 0.32
PRKCB-209ENST00000498058 KIAA1549Q9HCM3 1950 aa17.06■□□□□ 0.32
PRKCB-209ENST00000498058 A0A0A6YYD5 115 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 TRGV5A0A0B4J1U4 118 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 FIGNL2A6NMB9 653 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 KDM4EB2RXH2 506 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-209ENST00000498058 C2P06681 752 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 COX7A2P14406 83 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 SERPINB1P30740 379 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 PIK3CBP42338 1070 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 ZFP36L2P47974 494 aaKnown RBP17.05■□□□□ 0.32
PRKCB-209ENST00000498058 PIK3CGP48736 1102 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 RAP1GDS1P52306 607 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 SLC37A1P57057 533 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 ZNF267Q14586 743 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-209ENST00000498058 TSNAXIP1Q2TAA8 658 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 C1orf185Q5T7R7 199 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 TMEM64Q6YI46 380 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 MZB1Q8WU39 189 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 TANKQ92844 425 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 RBM18Q96H35 190 aaKnown RBP17.05■□□□□ 0.32
PRKCB-209ENST00000498058 GPR78Q96P69 363 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 ZNF559Q9BR84 538 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 SLC6A15Q9H2J7 730 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 LDAHQ9H6V9 325 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 ACAD8Q9UKU7 415 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 RNF11Q9Y3C5 154 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 TSC22D4Q9Y3Q8 395 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 AKAP6Q13023 2319 aa17.05■□□□□ 0.32
PRKCB-209ENST00000498058 SETD2Q9BYW2 2564 aaPredicted RBP17.05■□□□□ 0.32
PRKCB-209ENST00000498058 EXPH5Q8NEV8 1989 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 CCDC189A1A4V9 331 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 FOXO6A8MYZ6 492 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 SIX3O95343 332 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-209ENST00000498058 GPR75O95800 540 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 FBXO45P0C2W1 286 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 NEK2P51955 445 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 PLIN5Q00G26 463 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 EBPQ15125 230 aaKnown RBP17.04■□□□□ 0.32
PRKCB-209ENST00000498058 PFKFB4Q16877 469 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 SPRED3Q2MJR0 410 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 FAM219BQ5XKK7 198 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 TRABD2AQ86V40 505 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 MYLK4Q86YV6 388 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-209ENST00000498058 ST13P4Q8IZP2 240 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-209ENST00000498058 LRRC25Q8N386 305 aaPredicted RBP17.04■□□□□ 0.32
PRKCB-209ENST00000498058 FBXW8Q8N3Y1 598 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 WDR20Q8TBZ3 569 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 SLC22A8Q8TCC7 542 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 GAL3ST4Q96RP7 486 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 WWTR1Q9GZV5 400 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 DDX31Q9H8H2 851 aaKnown RBP17.04■□□□□ 0.32
PRKCB-209ENST00000498058 TMBIM4Q9HC24 238 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 ZFP64Q9NPA5 681 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 ZNF446Q9NWS9 450 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 MS4A12Q9NXJ0 267 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 ALKBH4Q9NXW9 302 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 KCNN3Q9UGI6 736 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 ADGRE2Q9UHX3 823 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 PHF11Q9UIL8 331 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 L3MBTL1Q9Y468 752 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 ZFHX3Q15911 3703 aa17.04■□□□□ 0.32
PRKCB-209ENST00000498058 H0YIV9 168 aa17.03■□□□□ 0.32
PRKCB-209ENST00000498058 PGRMC2O15173 223 aa17.03■□□□□ 0.32
PRKCB-209ENST00000498058 HCN1O60741 890 aa17.03■□□□□ 0.32
PRKCB-209ENST00000498058 WDR1O75083 606 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms