RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 PTOV1Q86YD1 416 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 TMEM139Q8IV31 216 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 ZNF34Q8IZ26 560 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 CSGALNACT2Q8N6G5 542 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 SYT14Q8NB59 555 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 BHLHE22Q8NFJ8 381 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-224ENST00000497488 KCNG3Q8TAE7 436 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.54□□□□□ -1.52
BRCA1-224ENST00000497488 TMEM37Q8WXS4 190 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 RPL3LQ92901 407 aaKnown RBP5.54□□□□□ -1.52
BRCA1-224ENST00000497488 COQ8BQ96D53 544 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 AGPAT1Q99943 283 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 MIS12Q9H081 205 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 DNTTIP1Q9H147 329 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 LRRC4Q9HBW1 653 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 RAVER2Q9HCJ3 691 aaKnown RBP5.54□□□□□ -1.52
BRCA1-224ENST00000497488 PIPOXQ9P0Z9 390 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 MIOXQ9UGB7 285 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 SLC12A6Q9UHW9 1150 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 ZNF346Q9UL40 294 aaKnown RBP5.54□□□□□ -1.52
BRCA1-224ENST00000497488 NCKAP1Q9Y2A7 1128 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 CA5BQ9Y2D0 317 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 PCDHAC2Q9Y5I4 1007 aa5.54□□□□□ -1.52
BRCA1-224ENST00000497488 TULP4Q9NRJ4 1543 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 RGPD8O14715 1765 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 LOC100506127A0A0U1RQW1 187 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 GAGE12JA6NER3 117 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 SNTNA6NMZ2 147 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 I6L893 689 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 K7ERQ8 282 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 TULP2O00295 520 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 MDM4O15151 490 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 ITM2AO43736 263 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 ESRRBO95718 433 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 NHLRC4P0CG21 123 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 PRKACAP17612 351 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 CBLP22681 906 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 PSMA2P25787 234 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 ANXA13P27216 316 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 FDFT1P37268 417 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 RPL3P39023 403 aaKnown RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 LEPRP48357 1165 aaKnown RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 PPIAP62937 165 aaKnown RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 IRX3P78415 501 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 ENPEPQ07075 957 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 TRAP1Q12931 704 aaKnown RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 CUL1Q13616 776 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 MTHFSDQ2M296 383 aaKnown RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 Q3ZCU0 254 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 CDC42EP5Q6NZY7 148 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 SLC16A12Q6ZSM3 486 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 COX8CQ7Z4L0 72 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 ADHFE1Q8IWW8 467 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 EFCAB13Q8IY85 973 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 CCDC36Q8IYA8 594 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 CRYBG2Q8N1P7 616 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 DDHD1Q8NEL9 900 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 FAM81AQ8TBF8 368 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 LINC00476Q8WZB0 136 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 PHF21AQ96BD5 680 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 ZNF707Q96C28 371 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 SLC25A36Q96CQ1 311 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 HMCESQ96FZ2 354 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 APOLD1Q96LR9 279 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 SIGLEC11Q96RL6 698 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 KRT12Q99456 494 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 DPEP2Q9H4A9 486 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 SYNDIG1Q9H7V2 258 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 KAT8Q9H7Z6 458 aaKnown RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 UFSP2Q9NUQ7 469 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 EXOC1Q9NV70 894 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 SMOXQ9NWM0 555 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 PDP1Q9P0J1 537 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 PACSIN2Q9UNF0 486 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 DIMT1Q9UNQ2 313 aaKnown RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 SLC9A8Q9Y2E8 581 aa5.53□□□□□ -1.52
BRCA1-224ENST00000497488 KLF2Q9Y5W3 355 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 V9GYY5 206 aaPredicted RBP5.53□□□□□ -1.52
BRCA1-224ENST00000497488 ATP7BP35670 1465 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 ANKARQ7Z5J8 1434 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 OR6C74A6NCV1 312 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 ZNF254O75437 659 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 ANP32DO95626 131 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 POP4O95707 220 aaKnown RBP5.52□□□□□ -1.53
BRCA1-224ENST00000497488 EML2O95834 649 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 HPRP00739 348 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 ACADSBP45954 432 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 PITX1P78337 314 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-224ENST00000497488 NAAAQ02083 359 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 GPR50Q13585 617 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 CDSNQ15517 529 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 CLPPQ16740 277 aaPredicted RBP5.52□□□□□ -1.53
BRCA1-224ENST00000497488 ITPRIPL2Q3MIP1 535 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 XKR7Q5GH72 579 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 FAM69BQ5VUD6 431 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 RAET1LQ5VY80 246 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 RTL6Q6ICC9 239 aa5.52□□□□□ -1.53
BRCA1-224ENST00000497488 COMTD1Q86VU5 262 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms