RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 A0A1B0GTH9 108 aa4□□□□□ -1.77
MDM2-220ENST00000496959 NPIPA3F8WFD2 350 aa4□□□□□ -1.77
MDM2-220ENST00000496959 PGK1P00558 417 aa4□□□□□ -1.77
MDM2-220ENST00000496959 THY1P04216 161 aa4□□□□□ -1.77
MDM2-220ENST00000496959 FAM200BP0CF97 657 aa4□□□□□ -1.77
MDM2-220ENST00000496959 SPP1P10451 314 aa4□□□□□ -1.77
MDM2-220ENST00000496959 SSTR1P30872 391 aa4□□□□□ -1.77
MDM2-220ENST00000496959 RPL34P49207 117 aaKnown RBP4□□□□□ -1.77
MDM2-220ENST00000496959 GABPAQ06546 454 aa4□□□□□ -1.77
MDM2-220ENST00000496959 RUNX3Q13761 415 aa4□□□□□ -1.77
MDM2-220ENST00000496959 UGCGQ16739 394 aa4□□□□□ -1.77
MDM2-220ENST00000496959 KNOP1Q1ED39 458 aaKnown RBP4□□□□□ -1.77
MDM2-220ENST00000496959 ATAD3CQ5T2N8 411 aa4□□□□□ -1.77
MDM2-220ENST00000496959 EMBQ6PCB8 327 aa4□□□□□ -1.77
MDM2-220ENST00000496959 PPP1R21Q6ZMI0 780 aa4□□□□□ -1.77
MDM2-220ENST00000496959 FAM219AQ8IW50 185 aa4□□□□□ -1.77
MDM2-220ENST00000496959 PHOSPHO2Q8TCD6 241 aa4□□□□□ -1.77
MDM2-220ENST00000496959 RFT1Q96AA3 541 aa4□□□□□ -1.77
MDM2-220ENST00000496959 NABP1Q96AH0 204 aa4□□□□□ -1.77
MDM2-220ENST00000496959 ALKBH7Q9BT30 221 aaPredicted RBP4□□□□□ -1.77
MDM2-220ENST00000496959 NACAP1Q9BZK3 213 aa4□□□□□ -1.77
MDM2-220ENST00000496959 RABEP2Q9H5N1 569 aa4□□□□□ -1.77
MDM2-220ENST00000496959 SP140LQ9H930 580 aa4□□□□□ -1.77
MDM2-220ENST00000496959 WDR41Q9HAD4 459 aa4□□□□□ -1.77
MDM2-220ENST00000496959 CLEC5AQ9NY25 188 aa4□□□□□ -1.77
MDM2-220ENST00000496959 Q9Y3F1 56 aa4□□□□□ -1.77
MDM2-220ENST00000496959 LIPGQ9Y5X9 500 aa4□□□□□ -1.77
MDM2-220ENST00000496959 UNC80Q8N2C7 3258 aa4□□□□□ -1.77
MDM2-220ENST00000496959 BRWD1Q9NSI6 2320 aa4□□□□□ -1.77
MDM2-220ENST00000496959 SCN10AQ9Y5Y9 1956 aa4□□□□□ -1.77
MDM2-220ENST00000496959 RALGAPA2Q2PPJ7 1873 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 UBE2CO00762 179 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 ASGR1P07306 291 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 ANPEPP15144 967 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 TCF4P15884 667 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 RPL9P32969 192 aaKnown RBP3.99□□□□□ -1.77
MDM2-220ENST00000496959 POU5F1Q01860 360 aaKnown RBP3.99□□□□□ -1.77
MDM2-220ENST00000496959 TAZQ16635 292 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 LRRC37A5PQ49AS3 106 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 PRR30Q53SZ7 412 aaPredicted RBP3.99□□□□□ -1.77
MDM2-220ENST00000496959 SNRNP48Q6IEG0 339 aaKnown RBP3.99□□□□□ -1.77
MDM2-220ENST00000496959 TCEAL6Q6IPX3 200 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 ZSCAN25Q6NSZ9 544 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 Q71RC1 249 aaPredicted RBP3.99□□□□□ -1.77
MDM2-220ENST00000496959 KRT74Q7RTS7 529 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 FAM9BQ8IZU0 186 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 Q8N7P7 452 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 ACER1Q8TDN7 264 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 APOL2Q9BQE5 337 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 NAA11Q9BSU3 229 aaPredicted RBP3.99□□□□□ -1.77
MDM2-220ENST00000496959 SLITRK2Q9H156 845 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 ABCB10Q9NRK6 738 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 ABCD2Q9UBJ2 740 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 NCKAP1Q9Y2A7 1128 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 MICAL3Q7RTP6 2002 aa3.99□□□□□ -1.77
MDM2-220ENST00000496959 MYH6P13533 1939 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 SURF6O75683 361 aaKnown RBP3.98□□□□□ -1.77
MDM2-220ENST00000496959 C9P02748 559 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 CCDC175P0C221 793 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 FDPSP14324 419 aaKnown RBP3.98□□□□□ -1.77
MDM2-220ENST00000496959 SLC1A4P43007 532 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 PPP5CP53041 499 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 PPIAP62937 165 aaKnown RBP3.98□□□□□ -1.77
MDM2-220ENST00000496959 TRA2BP62995 288 aaKnown RBP3.98□□□□□ -1.77
MDM2-220ENST00000496959 PPA1Q15181 289 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 RASA2Q15283 850 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 Q1RN00 199 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 TMEM44Q2T9K0 475 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 CCDC184Q52MB2 194 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.98□□□□□ -1.77
MDM2-220ENST00000496959 ARMCX2Q7L311 632 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 ADCK2Q7Z695 626 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 HIPK1Q86Z02 1210 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 LRRC49Q8IUZ0 686 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 APCDD1Q8J025 514 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 RIOK1Q9BRS2 568 aaKnown RBP3.98□□□□□ -1.77
MDM2-220ENST00000496959 CHMP4BQ9H444 224 aaKnown RBP3.98□□□□□ -1.77
MDM2-220ENST00000496959 DPEP2Q9H4A9 486 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 FNDC4Q9H6D8 234 aaPredicted RBP3.98□□□□□ -1.77
MDM2-220ENST00000496959 DEPPQ9NTK1 212 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 CTNNA3Q9UI47 895 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 NAALAD2Q9Y3Q0 740 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 KIF25-AS1Q9Y6Z4 181 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 NLRC5Q86WI3 1866 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 A0A0C4DFX4 3053 aa3.98□□□□□ -1.77
MDM2-220ENST00000496959 COL4A6Q14031 1691 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 A8MU76 341 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 A8MXE2 369 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 PRSS46E5RG02 174 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 LMO7DNF2Z398 122 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 PGRMC2O15173 223 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 P4HA2O15460 535 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 HMMRO75330 724 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 PGK2P07205 417 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 RAD52P43351 418 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 DYNLL1P63167 89 aaKnown RBP3.97□□□□□ -1.77
MDM2-220ENST00000496959 TNK1Q13470 666 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 CAMK2DQ13557 499 aa3.97□□□□□ -1.77
MDM2-220ENST00000496959 SHROOM1Q2M3G4 852 aaPredicted RBP3.97□□□□□ -1.77
MDM2-220ENST00000496959 HYAL4Q2M3T9 481 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms