RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 MANFP55145 182 aaKnown RBP17.12■□□□□ 0.33
TSSC4-210ENST00000496468 SLC26A5P58743 744 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 VAC14Q08AM6 782 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 BTBD16Q32M84 506 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 ZNF628Q5EBL2 1059 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 ANXA8L1Q5VT79 327 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 INO80CQ6PI98 192 aaPredicted RBP17.12■□□□□ 0.33
TSSC4-210ENST00000496468 CLEC1AQ8NC01 280 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 MORN4Q8NDC4 146 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 VPS37AQ8NEZ2 397 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 B3GNT7Q8NFL0 401 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 ADCY4Q8NFM4 1077 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 SLC2A12Q8TD20 617 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 ZNF675Q8TD23 568 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 BCAS4Q8TDM0 211 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 FBXL20Q96IG2 436 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 OR8D2Q9GZM6 311 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 MAT2BQ9NZL9 334 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 COPS7AQ9UBW8 275 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 ERVK-19Q9WJR5 959 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 CROCCQ5TZA2 2017 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 DMXL2Q8TDJ6 3036 aa17.12■□□□□ 0.33
TSSC4-210ENST00000496468 CHD8Q9HCK8 2581 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 A0A1W2PRB8 838 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 CCDC154A6NI56 674 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 ARGFXA6NJG6 315 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 CFLARO15519 480 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 DCTN3O75935 186 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 DDAH2O95865 285 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 C6orf47O95873 294 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 CT62P0C5K7 136 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 WNT3P56703 355 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 ZNF267Q14586 743 aaPredicted RBP17.11■□□□□ 0.33
TSSC4-210ENST00000496468 MLC1Q15049 377 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 PRICKLE4Q2TBC4 344 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 DEFB109BQ30KR1 87 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 DCAF10Q5QP82 559 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 PLAG1Q6DJT9 500 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 TMEM107Q6UX40 140 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 GK5Q6ZS86 529 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 MSANTD1Q6ZTZ1 278 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 ZNF551Q7Z340 670 aaPredicted RBP17.11■□□□□ 0.33
TSSC4-210ENST00000496468 MTDHQ86UE4 582 aaKnown RBP17.11■□□□□ 0.33
TSSC4-210ENST00000496468 ANKRD46Q86W74 232 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 CCDC197Q8NCU1 140 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 DOK4Q8TEW6 326 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 NCLNQ969V3 563 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 SPDL1Q96EA4 605 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 OR52E6Q96RD3 313 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 ARMCX1Q9P291 453 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 ZMIZ1Q9ULJ6 1067 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 CFAP47Q6ZTR5 3102 aa17.11■□□□□ 0.33
TSSC4-210ENST00000496468 SLC22A2O15244 555 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 MC3RP41968 323 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 CDK9P50750 372 aaKnown RBP17.1■□□□□ 0.33
TSSC4-210ENST00000496468 AP2B1P63010 937 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 CXADRP78310 365 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 MRPS35P82673 323 aaKnown RBP17.1■□□□□ 0.33
TSSC4-210ENST00000496468 KLF10Q13118 480 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 AIMP2Q13155 320 aaKnown RBP17.1■□□□□ 0.33
TSSC4-210ENST00000496468 MAPRE2Q15555 327 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 BLOC1S3Q6QNY0 202 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 FUNDC1Q8IVP5 155 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 CLECL1Q8IZS7 167 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 ANKS4BQ8N8V4 417 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 TMEM102Q8N9M5 508 aaPredicted RBP17.1■□□□□ 0.33
TSSC4-210ENST00000496468 NFAM1Q8NET5 270 aaPredicted RBP17.1■□□□□ 0.33
TSSC4-210ENST00000496468 OR4A15Q8NGL6 344 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 OR5P2Q8WZ92 322 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 KAT2AQ92830 837 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 VMP1Q96GC9 406 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 IMMP1LQ96LU5 166 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 RMND5AQ9H871 391 aa17.1■□□□□ 0.33
TSSC4-210ENST00000496468 PRSS51A0A1B0GVH4 220 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 DYTNA2CJ06 578 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 MASP2O00187 686 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 HRKO00198 91 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 ABCB1P08183 1280 aaPredicted RBP17.09■□□□□ 0.33
TSSC4-210ENST00000496468 ICAM2P13598 275 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 CAPN3P20807 821 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 ADSLP30566 484 aaPredicted RBP17.09■□□□□ 0.33
TSSC4-210ENST00000496468 SOAT1P35610 550 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 LRRC74AQ0VAA2 488 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 MAP4K2Q12851 820 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 CHAF1BQ13112 559 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 FAM111BQ6SJ93 734 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 RNF111Q6ZNA4 994 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 SZRD1Q7Z422 152 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 KBTBD2Q8IY47 623 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 OR1N1Q8NGS0 311 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 M1APQ8TC57 530 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 VPS33AQ96AX1 596 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 ERP27Q96DN0 273 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 CCDC115Q96NT0 180 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 MMP25Q9NPA2 562 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 DDX18Q9NVP1 670 aaKnown RBP17.09■□□□□ 0.33
TSSC4-210ENST00000496468 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.09■□□□□ 0.33
TSSC4-210ENST00000496468 PTGFRNQ9P2B2 879 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 BTNL2Q9UIR0 455 aa17.09■□□□□ 0.33
TSSC4-210ENST00000496468 PCDHGB4Q9UN71 923 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms