RNA–Protein interactions for RNA: ENST00000496262.1

RNF220-217, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 840 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-217ENST00000496262 MDGA2Q7Z553 956 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 FGD2Q7Z6J4 655 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 ADAMTSL2Q86TH1 951 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 C10orf107Q8IVU9 208 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 CHERPQ8IWX8 916 aaKnown RBP10.15□□□□□ -0.78
RNF220-217ENST00000496262 DEFB107AQ8IZN7 70 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 FBXW8Q8N3Y1 598 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 SNX31Q8N9S9 440 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 APCDD1LQ8NCL9 501 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 TMEM52Q8NDY8 209 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 CA5BP1Q8WTZ4 195 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 EXT2Q93063 718 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 GAL3ST3Q96A11 431 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 ESAMQ96AP7 390 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 SDCCAG3Q96C92 435 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 SMIM10Q96HG1 83 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 VPS39Q96JC1 886 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 SORT1Q99523 831 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 PRTFDC1Q9NRG1 225 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 PNPOQ9NVS9 261 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 WWOXQ9NZC7 414 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 KCMF1Q9P0J7 381 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 MID2Q9UJV3 735 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 ZNF223Q9UK11 482 aaPredicted RBP10.15□□□□□ -0.78
RNF220-217ENST00000496262 PRPF19Q9UMS4 504 aaKnown RBP10.15□□□□□ -0.78
RNF220-217ENST00000496262 ERVK-11Q9UQG0 969 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 ASB1Q9Y576 335 aa10.15□□□□□ -0.78
RNF220-217ENST00000496262 PDZD2O15018 2839 aa10.15□□□□□ -0.79
RNF220-217ENST00000496262 TACC2O95359 2948 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 C15orf38-AP3S2A0A0A6YYH1 394 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 LRIT2A6NDA9 550 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 ANKDD1BA6NHY2 528 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 E9PLN8 166 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 G3V3Y1 287 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 PHGDHO43175 533 aaKnown RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 PRKNO60260 465 aaPredicted RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 OR2J2O76002 312 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 ALDOAP04075 364 aaKnown RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 NCF2P19878 526 aaPredicted RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 CERS1P27544 350 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 PTGS2P35354 604 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 SLC6A12P48065 614 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 HNMTP50135 292 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 SSR4P51571 173 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 RAB38P57729 211 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 CDKL1Q00532 357 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 KLF10Q13118 480 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 GRAMD1BQ3KR37 738 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 OGFRL1Q5TC84 451 aaPredicted RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 C16orf89Q6UX73 402 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 ARPINQ7Z6K5 226 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 KLHDC8AQ8IYD2 350 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 ZNF295-AS1Q8N0V1 137 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 KRT78Q8N1N4 520 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 RHBDF1Q96CC6 855 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 CCDC124Q96CT7 223 aaKnown RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 MS4A6EQ96DS6 147 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 VMP1Q96GC9 406 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 CSF3RQ99062 836 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 SERPINI1Q99574 410 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 VKORC1Q9BQB6 163 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 TMEM79Q9BSE2 394 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 REXO4Q9GZR2 422 aaKnown RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 RHOJQ9H4E5 214 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 TRIM45Q9H8W5 580 aaPredicted RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 COPS7BQ9H9Q2 264 aaPredicted RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 CLK4Q9HAZ1 481 aaKnown RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 C6orf203Q9P0P8 240 aaPredicted RBP10.14□□□□□ -0.79
RNF220-217ENST00000496262 TXNDC16Q9P2K2 825 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 BCAP29Q9UHQ4 241 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 POMPQ9Y244 141 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 MMACHCQ9Y4U1 282 aa10.14□□□□□ -0.79
RNF220-217ENST00000496262 FAM166BA8MTA8 275 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 A8MVJ9 347 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 H3BNX3 289 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 WWP2O00308 870 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 CLDN4O14493 209 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 ADAM10O14672 748 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 SH3BGRLO75368 114 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 SMIM18P0DKX4 95 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 CPA3P15088 417 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 ZNF10P21506 573 aaPredicted RBP10.13□□□□□ -0.79
RNF220-217ENST00000496262 GP5P40197 560 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 MAGEA12P43365 314 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 HSPA13P48723 471 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 HSPA7P48741 367 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 NR0B1P51843 470 aaKnown RBP10.13□□□□□ -0.79
RNF220-217ENST00000496262 MTTPP55157 894 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 HSD17B7P56937 341 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 KRTAP10-9P60411 292 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 PLGLB1Q02325 96 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 ID2Q02363 134 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 TGFBIQ15582 683 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 LRRC23Q53EV4 343 aaPredicted RBP10.13□□□□□ -0.79
RNF220-217ENST00000496262 XKR6Q5GH73 641 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 GRTP1Q5TC63 336 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 TRIM40Q6P9F5 258 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 IL20RBQ6UXL0 311 aa10.13□□□□□ -0.79
RNF220-217ENST00000496262 MEX3BQ6ZN04 569 aaKnown RBP10.13□□□□□ -0.79
RNF220-217ENST00000496262 SPATA24Q86W54 205 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms