RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 TUBA1CQ9BQE3 449 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 TTYH3Q9C0H2 523 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 LHPPQ9H008 270 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 CARD9Q9H257 536 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 CNGB3Q9NQW8 809 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 SOHLH2Q9NX45 425 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 RAB20Q9NX57 234 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 IL1RAPL1Q9NZN1 696 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 EPHA6Q9UF33 1036 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 GPR160Q9UJ42 338 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 NOCTQ9UK39 431 aaKnown RBP4.33□□□□□ -1.72
XPA-204ENST00000496104 CLEC4AQ9UMR7 237 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 HS3ST3B1Q9Y662 390 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 SPACA6W5XKT8 324 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 KIAA1109Q2LD37 5005 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 MALRD1Q5VYJ5 2156 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 MED12Q93074 2177 aa4.33□□□□□ -1.72
XPA-204ENST00000496104 GXYLT2A0PJZ3 443 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ADAMDEC1O15204 470 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 EIF3DO15371 548 aaKnown RBP eCLIP4.32□□□□□ -1.72
XPA-204ENST00000496104 ERLIN1O75477 346 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 CIB2O75838 187 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 WDPCPO95876 746 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 GSRP00390 522 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 AK1P00568 194 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 RHOCP08134 193 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 CELA2AP08217 269 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ABHD2P08910 425 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 CBSLP0DN79 551 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 EPORP19235 508 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 PON1P27169 355 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 RBL1P28749 1068 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 CBSP35520 551 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 HSD17B2P37059 387 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 GABRB2P47870 512 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 COMPP49747 757 aaPredicted RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 RGS7P49802 495 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ZNF135P52742 658 aaPredicted RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 PDE1BQ01064 536 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 SPIBQ01892 262 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 GUCY1B3Q02153 619 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 RBBP5Q15291 538 aaKnown RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 PCGF3Q3KNV8 242 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 IGSF11Q5DX21 431 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 C6orf136Q5SQH8 315 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 C6orf52Q5T4I8 152 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ATG9BQ674R7 924 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 FCRLBQ6BAA4 426 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 VASNQ6EMK4 673 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 RAET1GQ6H3X3 334 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 PMF1Q6P1K2 205 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ZCCHC12Q6PEW1 402 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 C12orf54Q6X4T0 127 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 B3GNT6Q6ZMB0 384 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 RFLNAQ6ZTI6 216 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ZNF572Q7Z3I7 529 aaPredicted RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 LRRC49Q8IUZ0 686 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ZCCHC7Q8N3Z6 543 aaKnown RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 RASGEF1CQ8N431 466 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 GUF1Q8N442 669 aaKnown RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 LRRC17Q8N6Y2 441 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 SIDT2Q8NBJ9 832 aaKnown RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 OR2AP1Q8NGE2 309 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 OR8K5Q8NH50 307 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 RAB40AQ8WXH6 277 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 CNOT9Q92600 299 aaKnown RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 HAS2Q92819 552 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ISG20Q96AZ6 181 aaKnown RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 DHX58Q96C10 678 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ZMYND19Q96E35 227 aaPredicted RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 RNFT2Q96EX2 444 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ATP6V1G3Q96LB4 118 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 SAMD8Q96LT4 415 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 COQ10AQ96MF6 247 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 GDAP1L1Q96MZ0 367 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 RPRD1AQ96P16 312 aaPredicted RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 WDFY2Q96P53 400 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ZBTB18Q99592 522 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 INPP5KQ9BT40 448 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 MECRQ9BV79 373 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 NPLQ9BXD5 320 aaPredicted RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 RTN4RQ9BZR6 473 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 SLC7A5P2Q9GIP4 190 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 EPB41L4BQ9H329 900 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 ZNF696Q9H7X3 374 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 UCK1Q9HA47 277 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 OLFML3Q9NRN5 406 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 HOMER3Q9NSC5 361 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 FARSBQ9NSD9 589 aaKnown RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 SAMSN1Q9NSI8 373 aaKnown RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 TRIM10Q9UDY6 481 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 BAIAP2L1Q9UHR4 511 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 DNAI1Q9UI46 699 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 HAO1Q9UJM8 370 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 TSPAN16Q9UKR8 245 aa4.32□□□□□ -1.72
XPA-204ENST00000496104 EXO1Q9UQ84 846 aaKnown RBP4.32□□□□□ -1.72
XPA-204ENST00000496104 LOC102723996A0A087X1L8 192 aa4.31□□□□□ -1.72
XPA-204ENST00000496104 C15orf38-AP3S2A0A0A6YYH1 394 aa4.31□□□□□ -1.72
XPA-204ENST00000496104 C13orf42A0A1B0GVH6 325 aa4.31□□□□□ -1.72
XPA-204ENST00000496104 SDR42E2A6NKP2 422 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms