RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 CERS1P27544 350 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 CALRP27797 417 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 PEBP1P30086 187 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 GSTT1P30711 240 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 CDK9P50750 372 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 UGT2B15P54855 530 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 CDH12P55289 794 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 PCBP3P57721 371 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 PCBP4P57723 403 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 CXCR4P61073 352 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 BTN3A2P78410 334 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 KCNJ10P78508 379 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 VLDLRP98155 873 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 HHEXQ03014 270 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 MVKQ03426 396 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 POU4F2Q12837 409 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 TUBA3CQ13748 450 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 GPR18Q14330 331 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 UBXN2BQ14CS0 331 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 TCEA2Q15560 299 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 NKG7Q16617 165 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ZBED5Q49AG3 693 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 GPAT3Q53EU6 434 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 EIPR1Q53HC9 387 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ARSJQ5FYB0 599 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 COLEC12Q5KU26 742 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 COX20Q5RI15 118 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 KDM4DQ6B0I6 523 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 MRM1Q6IN84 353 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 FIGLAQ6QHK4 219 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 TBPL2Q6SJ96 375 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 SLC36A4Q6YBV0 504 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ZNF551Q7Z340 670 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 C16orf62Q7Z3J2 963 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 VTCN1Q7Z7D3 282 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 IQCHQ86VS3 1027 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 SLC44A2Q8IWA5 706 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 ADGRF3Q8IZF5 1079 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 LGI4Q8N135 537 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 LRRC25Q8N386 305 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 SDR16C5Q8N3Y7 309 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 FBXL6Q8N531 539 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 OR8K5Q8NH50 307 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ZNF420Q8TAQ5 688 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 ZCCHC10Q8TBK6 192 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ZDHHC1Q8WTX9 485 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 IPCEF1Q8WWN9 437 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 MAL2Q969L2 176 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ZNF566Q969W8 418 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 OTUB1Q96FW1 271 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 TMEM19Q96HH6 336 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 AMDHD1Q96NU7 426 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 MUS81Q96NY9 551 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 NECAB3Q96P71 396 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 MS4A4EQ96PG1 132 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ZNF300Q96RE9 604 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 MBOAT4Q96T53 435 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 PIP5K1AQ99755 562 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 NPLQ9BXD5 320 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 PRRG3Q9BZD7 231 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 OR51I1Q9H343 314 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 GLIPR2Q9H4G4 154 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 C6orf106Q9H6K1 298 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 ARMC7Q9H6L4 198 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 SMURF2Q9HAU4 748 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 LYRM4Q9HD34 91 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 PAPOLBQ9NRJ5 636 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 SPHK1Q9NYA1 384 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 TMEM9Q9P0T7 183 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ZNF624Q9P2J8 865 aaPredicted RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 CPNE7Q9UBL6 633 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 KLF15Q9UIH9 416 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 CA14Q9ULX7 337 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 CLCA2Q9UQC9 943 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 LIPT1Q9Y234 373 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 MRPS33Q9Y291 106 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 TESMINQ9Y4I5 508 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 ENPP4Q9Y6X5 453 aa6.54□□□□□ -1.36
USP39-219ENST00000496047 TNRC6BQ9UPQ9 1833 aaKnown RBP6.54□□□□□ -1.36
USP39-219ENST00000496047 PI4KAP42356 2102 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 IGKV1-8A0A0C4DH67 115 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 A0A0G2JPF8 293 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 A0A0J9YVX5 310 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 A6NCN8 305 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 FIGNL2A6NMB9 653 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 HNRNPCL2B2RXH8 293 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 B4DGG1 531 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 HNRNPCL3B7ZW38 293 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 SLC1A7O00341 560 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 FAAHO00519 579 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 YY2O15391 372 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 NARSO43776 548 aaKnown RBP6.53□□□□□ -1.36
USP39-219ENST00000496047 FAM20BO75063 409 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 AK1P00568 194 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 ALPPP05187 535 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 TFAP2AP05549 437 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 GNAO1P09471 354 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 IFI6P09912 130 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 HNRNPCL4P0DMR1 293 aa6.53□□□□□ -1.36
USP39-219ENST00000496047 VSIG8P0DPA2 414 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms