RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 CXorf21Q9HAI6 301 aa9.13□□□□□ -0.95
CALD1-223ENST00000496024 MYNNQ9NPC7 610 aa9.13□□□□□ -0.95
CALD1-223ENST00000496024 MIEF1Q9NQG6 463 aa9.13□□□□□ -0.95
CALD1-223ENST00000496024 SIRT5Q9NXA8 310 aa9.13□□□□□ -0.95
CALD1-223ENST00000496024 BAIAP2L1Q9UHR4 511 aa9.13□□□□□ -0.95
CALD1-223ENST00000496024 ENTPD4Q9Y227 616 aa9.13□□□□□ -0.95
CALD1-223ENST00000496024 RAP2CQ9Y3L5 183 aa9.13□□□□□ -0.95
CALD1-223ENST00000496024 EML6Q6ZMW3 1958 aa9.13□□□□□ -0.95
CALD1-223ENST00000496024 SHANK1Q9Y566 2161 aa9.13□□□□□ -0.95
CALD1-223ENST00000496024 ZGRF1Q86YA3 2104 aa9.13□□□□□ -0.95
CALD1-223ENST00000496024 UQCRHLA0A096LP55 91 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 TMEM200CA6NKL6 621 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 PRAMEF2O60811 474 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 OR2J2O76002 312 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 IGKV3-11P04433 115 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 KITP10721 976 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 BCKDHAP12694 445 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 SDC1P18827 310 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 PRPH2P23942 346 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 RPL14P50914 215 aaKnown RBP9.12□□□□□ -0.95
CALD1-223ENST00000496024 SSR4P51571 173 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 SRSF11Q05519 484 aaKnown RBP9.12□□□□□ -0.95
CALD1-223ENST00000496024 EXOSC7Q15024 291 aaKnown RBP9.12□□□□□ -0.95
CALD1-223ENST00000496024 PRSS53Q2L4Q9 553 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 SPRED3Q2MJR0 410 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 ATP6AP1LQ52LC2 224 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 ZNF766Q5HY98 468 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 ATG16L1Q676U5 607 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 ANKRD26P1Q6NSI1 321 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 IL20RBQ6UXL0 311 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 RNF165Q6ZSG1 346 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 SLC29A4Q7RTT9 530 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 TICAM1Q8IUC6 712 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 C9orf40Q8IXQ3 194 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 LGI4Q8N135 537 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 LRRC25Q8N386 305 aaPredicted RBP9.12□□□□□ -0.95
CALD1-223ENST00000496024 TMEM156Q8N614 296 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 OR5L2Q8NGL0 311 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 KAT2AQ92830 837 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 CNRIP1Q96F85 164 aaPredicted RBP9.12□□□□□ -0.95
CALD1-223ENST00000496024 PPP3R2Q96LZ3 170 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 ZNF681Q96N22 645 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 SH3GL2Q99962 352 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 RNF32Q9H0A6 362 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 VIPAS39Q9H9C1 493 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 SLC35C2Q9NQQ7 365 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 GIMAP4Q9NUV9 329 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 ASF1BQ9NVP2 202 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 LRFN1Q9P244 771 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 MARCOQ9UEW3 520 aaPredicted RBP9.12□□□□□ -0.95
CALD1-223ENST00000496024 BCAP29Q9UHQ4 241 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.12□□□□□ -0.95
CALD1-223ENST00000496024 PCDHGA10Q9Y5H3 936 aa9.12□□□□□ -0.95
CALD1-223ENST00000496024 COPG1Q9Y678 874 aaKnown RBP9.12□□□□□ -0.95
CALD1-223ENST00000496024 NUP214P35658 2090 aaPredicted RBP9.12□□□□□ -0.95
CALD1-223ENST00000496024 ESPL1Q14674 2120 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 HMGB1P1B2RPK0 211 aaPredicted RBP9.11□□□□□ -0.95
CALD1-223ENST00000496024 J3QKU1 62 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 OR6B1O95007 311 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 CD46P15529 392 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 PCSK2P16519 638 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 DDCP20711 480 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 GALNSP34059 522 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 SOX3P41225 446 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 GSTM5P46439 218 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 CYB561P49447 251 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 HLCSP50747 726 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 SLC18A1P54219 525 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 SLC37A1P57057 533 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 MRPS35P82673 323 aaKnown RBP9.11□□□□□ -0.95
CALD1-223ENST00000496024 PMP22Q01453 160 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 MAPKAPK3Q16644 382 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 XKR7Q5GH72 579 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 C6orf136Q5SQH8 315 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 IL23RQ5VWK5 629 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 TRIM42Q8IWZ5 723 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 HOMEZQ8IX15 550 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 CYP4Z2PQ8N1L4 340 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 VWA5B2Q8N398 1253 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 LIX1Q8N485 282 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 FNDC5Q8NAU1 212 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 MDS2Q8NDY4 140 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 SIMC1Q8NDZ2 872 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 OR9A2Q8NGT5 310 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.11□□□□□ -0.95
CALD1-223ENST00000496024 ASB15Q8WXK1 588 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 SNRNP40Q96DI7 357 aaKnown RBP9.11□□□□□ -0.95
CALD1-223ENST00000496024 METTL2AQ96IZ6 378 aaKnown RBP9.11□□□□□ -0.95
CALD1-223ENST00000496024 C5orf34Q96MH7 638 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 RASL10BQ96S79 203 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 CCT7Q99832 543 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 NUF2Q9BZD4 464 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 OR10A5Q9H207 317 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 MANSC1Q9H8J5 431 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.11□□□□□ -0.95
CALD1-223ENST00000496024 THAP1Q9NVV9 213 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 MAT2BQ9NZL9 334 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 SH3BP4Q9P0V3 963 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 MYOTQ9UBF9 498 aa9.11□□□□□ -0.95
CALD1-223ENST00000496024 EXO1Q9UQ84 846 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms