RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 CDH2P19022 906 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 MLLT3P42568 568 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 EMP3P54852 163 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 VSX2P58304 361 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 SELENOWP63302 87 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 EIF3IQ13347 325 aaKnown RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 GAB1Q13480 694 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 TRA2AQ13595 282 aaKnown RBP eCLIP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 MPEG1Q2M385 716 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 DEFB134Q4QY38 66 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 CRB2Q5IJ48 1285 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 ATAD3BQ5T9A4 648 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 KRT80Q6KB66 452 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 TMEM214Q6NUQ4 689 aaKnown RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 TLDC1Q6P9B6 456 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 SPRED1Q7Z699 444 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 RNF130Q86XS8 419 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 ARMC8Q8IUR7 673 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 MCATQ8IVS2 390 aaKnown RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 KBTBD2Q8IY47 623 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 CLEC4FQ8N1N0 589 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 LRRC25Q8N386 305 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 TTC29Q8NA56 475 aaPredicted RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 ZCCHC10Q8TBK6 192 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 NRBF2Q96F24 287 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 DEPDC7Q96QD5 511 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 MAPKAP1Q9BPZ7 522 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 RBM4BQ9BQ04 359 aaKnown RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 RBM4Q9BWF3 364 aaKnown RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 GLIPR2Q9H4G4 154 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 CXorf36Q9H7Y0 433 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 CAAP1Q9H8G2 361 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 IL1RAPQ9NPH3 570 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 ZCCHC3Q9NUD5 404 aaKnown RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 TOR4AQ9NXH8 423 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 OAZ3Q9UMX2 235 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 DAPP1Q9UN19 280 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 FAM32AQ9Y421 112 aaKnown RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 ATG4BQ9Y4P1 393 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 PCDHGB3Q9Y5G1 929 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 AP4B1Q9Y6B7 739 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 V9GYQ6 96 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 APC2O95996 2303 aa9.67□□□□□ -0.86
HDAC3-214ENST00000495485 SNRNP200O75643 2136 aaKnown RBP9.67□□□□□ -0.86
HDAC3-214ENST00000495485 CPED1A4D0V7 1026 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 SAC3D1A6NKF1 404 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 NTN3O00634 580 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-214ENST00000495485 CLDN4O14493 209 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ADAMDEC1O15204 470 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ZBTB11O95625 1053 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-214ENST00000495485 CPNE6O95741 557 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 B3GALT4O96024 378 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ALBP02768 609 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ADRB1P08588 477 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ETFAP13804 333 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 MATN1P21941 496 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ALDH4A1P30038 563 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 MAGEA2P43356 314 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 AVPR1BP47901 424 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ALDH3A2P51648 485 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 GTF2A1P52655 376 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-214ENST00000495485 CRISP3P54108 245 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 RAD23AP54725 363 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 LIM2P55344 173 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 RAB38P57729 211 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 SHC2P98077 582 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 FAM53BQ14153 422 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 CEBPEQ15744 281 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ADRM1Q16186 407 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 NRF1Q16656 503 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 FAM214AQ32MH5 1076 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 IFI44LQ53G44 452 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 PRAMEF8Q5VWM4 474 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 PRAMEF7Q5VXH5 474 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 OR2T5Q6IEZ7 315 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 FRMPD2BQ6IN97 320 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 GUSBP11Q6P575 273 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 WDR74Q6RFH5 385 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ENPP6Q6UWR7 440 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 TMPRSS7Q7RTY8 843 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 ZNF551Q7Z340 670 aaPredicted RBP9.66□□□□□ -0.86
HDAC3-214ENST00000495485 PIWIL3Q7Z3Z3 882 aaKnown RBP9.66□□□□□ -0.86
HDAC3-214ENST00000495485 SZRD1Q7Z422 152 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 KMT5CQ86Y97 462 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 MARVELD2Q8N4S9 558 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 CBR4Q8N4T8 237 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 DHRSXQ8N5I4 330 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 OR2T29Q8NH02 315 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 OR5AK3PQ8NH89 298 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 NFKBIDQ8NI38 313 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 NCSTNQ92542 709 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 TMBIM1Q969X1 311 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 FKBP10Q96AY3 582 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 TPD52L3Q96J77 140 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 GFM1Q96RP9 751 aaKnown RBP9.66□□□□□ -0.86
HDAC3-214ENST00000495485 MACROD1Q9BQ69 325 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 STRADBQ9C0K7 418 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 AICDAQ9GZX7 198 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 EPS8L2Q9H6S3 715 aa9.66□□□□□ -0.86
HDAC3-214ENST00000495485 RUBCNLQ9H714 662 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms