RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 METTL2BQ6P1Q9 378 aaKnown RBP8.85□□□□□ -0.99
MSH5-218ENST00000494646 LYPD8Q6UX82 237 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 GK5Q6ZS86 529 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 CCDC71Q8IV32 467 aaPredicted RBP8.85□□□□□ -0.99
MSH5-218ENST00000494646 ZNF295-AS1Q8N0V1 137 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 MARVELD2Q8N4S9 558 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 FAM13CQ8NE31 585 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 OR4K14Q8NGD5 310 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 NUBPLQ8TB37 319 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 SLC22A8Q8TCC7 542 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 CA5BP1Q8WTZ4 195 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 PHF10Q8WUB8 498 aaKnown RBP8.85□□□□□ -0.99
MSH5-218ENST00000494646 SELENOMQ8WWX9 145 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 ART5Q96L15 291 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 JSRP1Q96MG2 331 aaPredicted RBP8.85□□□□□ -0.99
MSH5-218ENST00000494646 HBEGFQ99075 208 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 RHOXF2Q9BQY4 288 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 WWTR1Q9GZV5 400 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 TP63Q9H3D4 680 aaPredicted RBP8.85□□□□□ -0.99
MSH5-218ENST00000494646 ELOVL6Q9H5J4 265 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 LDAHQ9H6V9 325 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 EXO5Q9H790 373 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 ZDHHC11Q9H8X9 412 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 IL1RL2Q9HB29 575 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 TMEM216Q9P0N5 145 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 ZNF180Q9UJW8 692 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 ZNF225Q9UK10 706 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 TMCO1Q9UM00 188 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 SLC12A4Q9UP95 1085 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 RNF6Q9Y252 685 aa8.85□□□□□ -0.99
MSH5-218ENST00000494646 EXPH5Q8NEV8 1989 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 NKX2-6A6NCS4 301 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 ERAL1O75616 437 aaKnown RBP8.84□□□□□ -0.99
MSH5-218ENST00000494646 RPS17P08708 135 aaKnown RBP8.84□□□□□ -0.99
MSH5-218ENST00000494646 PORP16435 677 aaPredicted RBP8.84□□□□□ -0.99
MSH5-218ENST00000494646 DEKP35659 375 aaKnown RBP8.84□□□□□ -0.99
MSH5-218ENST00000494646 FEN1P39748 380 aaKnown RBP8.84□□□□□ -0.99
MSH5-218ENST00000494646 NUP107P57740 925 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 KCNJ2P63252 427 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 CLCQ05315 142 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 FOXO1Q12778 655 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 EBPQ15125 230 aaKnown RBP8.84□□□□□ -0.99
MSH5-218ENST00000494646 SPRED3Q2MJR0 410 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 UNC50Q53HI1 259 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 NDUFAF5Q5TEU4 345 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 HLA-DQA1Q5Y7H0 255 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 OR52E8Q6IFG1 317 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 LETMD1Q6P1Q0 360 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 ADGRD1Q6QNK2 874 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 FAM111BQ6SJ93 734 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 RGS9BPQ6ZS82 235 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 TRILQ7L0X0 811 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 PAGE2Q7Z2X7 111 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 IFT20Q8IY31 132 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 PRR22Q8IZ63 422 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 MMP21Q8N119 569 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 EID3Q8N140 333 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 METTL4Q8N3J2 472 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 FAM109AQ8N4B1 249 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 CEP112Q8N8E3 955 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 GOLM1Q8NBJ4 401 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 OR10G3Q8NGC4 313 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 OR10Q1Q8NGQ4 319 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 KIF18AQ8NI77 898 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 ZNF483Q8TF39 744 aaPredicted RBP8.84□□□□□ -0.99
MSH5-218ENST00000494646 TM4SF18Q96CE8 201 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 SPACA9Q96E40 222 aaPredicted RBP8.84□□□□□ -0.99
MSH5-218ENST00000494646 SMC6Q96SB8 1091 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 PELOQ9BRX2 385 aaKnown RBP8.84□□□□□ -0.99
MSH5-218ENST00000494646 OR10A5Q9H207 317 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 CXorf21Q9HAI6 301 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 PROK2Q9HC23 129 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.84□□□□□ -0.99
MSH5-218ENST00000494646 TBK1Q9UHD2 729 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 ACAD8Q9UKU7 415 aa8.84□□□□□ -0.99
MSH5-218ENST00000494646 VPS13CQ709C8 3753 aa8.83□□□□□ -1
MSH5-218ENST00000494646 FAM90A27PA6NNH2 459 aa8.83□□□□□ -1
MSH5-218ENST00000494646 ENO4A6NNW6 628 aa8.83□□□□□ -1
MSH5-218ENST00000494646 FOXO6A8MYZ6 492 aa8.83□□□□□ -1
MSH5-218ENST00000494646 RIPK2O43353 540 aa8.83□□□□□ -1
MSH5-218ENST00000494646 DLX3O60479 287 aa8.83□□□□□ -1
MSH5-218ENST00000494646 SEMA3DO95025 777 aa8.83□□□□□ -1
MSH5-218ENST00000494646 OTCP00480 354 aa8.83□□□□□ -1
MSH5-218ENST00000494646 CHN1P15882 459 aa8.83□□□□□ -1
MSH5-218ENST00000494646 TAC1P20366 129 aa8.83□□□□□ -1
MSH5-218ENST00000494646 SERPINB3P29508 390 aa8.83□□□□□ -1
MSH5-218ENST00000494646 GALNSP34059 522 aa8.83□□□□□ -1
MSH5-218ENST00000494646 TRPC1P48995 793 aa8.83□□□□□ -1
MSH5-218ENST00000494646 ALDH9A1P49189 494 aa8.83□□□□□ -1
MSH5-218ENST00000494646 MAN2A2P49641 1150 aa8.83□□□□□ -1
MSH5-218ENST00000494646 MAPK12P53778 367 aa8.83□□□□□ -1
MSH5-218ENST00000494646 FBXW4P57775 412 aa8.83□□□□□ -1
MSH5-218ENST00000494646 BTKQ06187 659 aa8.83□□□□□ -1
MSH5-218ENST00000494646 TBL3Q12788 808 aaKnown RBP8.83□□□□□ -1
MSH5-218ENST00000494646 SLC29A2Q14542 456 aa8.83□□□□□ -1
MSH5-218ENST00000494646 ZNF678Q5SXM1 525 aa8.83□□□□□ -1
MSH5-218ENST00000494646 BICRALQ6AI39 1079 aa8.83□□□□□ -1
MSH5-218ENST00000494646 DESI1Q6ICB0 168 aa8.83□□□□□ -1
MSH5-218ENST00000494646 SCIMPQ6UWF3 145 aa8.83□□□□□ -1
MSH5-218ENST00000494646 MEX3BQ6ZN04 569 aaKnown RBP8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms