RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 MAPKAPK3Q16644 382 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 KRTAP21-3Q3LHN1 58 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 SPIN4Q56A73 249 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 SPDYAQ5MJ70 313 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 CATSPEREQ5SY80 951 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 MAVSQ7Z434 540 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 SRFBP1Q8NEF9 429 aaKnown RBP10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 OR5T3Q8NGG3 340 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 WDR20Q8TBZ3 569 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 CA5BP1Q8WTZ4 195 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 METTL21AQ8WXB1 218 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 RERGQ96A58 199 aaPredicted RBP10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 MVB12AQ96EY5 273 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 CMTM7Q96FZ5 175 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 ZNF354BQ96LW1 612 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 LRRC37BQ96QE4 947 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 TREX2Q9BQ50 279 aaPredicted RBP10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 RHBGQ9H310 441 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 GSX1Q9H4S2 264 aaPredicted RBP10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 CDCP1Q9H5V8 836 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 TNFRSF12AQ9NP84 129 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 C1orf109Q9NX04 203 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 AHSPQ9NZD4 102 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 NOP53Q9NZM5 478 aaKnown RBP10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 TEKT2Q9UIF3 430 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 MAPRE3Q9UPY8 281 aa10.96□□□□□ -0.65
CSNK1E-212ENST00000494610 ZNF407Q9C0G0 2248 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 A0A088AWK7 358 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 A0A1B0GTL3 188 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 FEZF1A0PJY2 475 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 UBDO15205 165 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 RDH16O75452 317 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 PDYNP01213 254 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 SLC35G6P0C7Q6 338 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 LINC00032P0C843 101 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 IDO1P14902 403 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 CD22P20273 847 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 ZNF10P21506 573 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 PTX3P26022 381 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 EPHA3P29320 983 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 GSTM5P46439 218 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 SCTRP47872 440 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 ATP4BP51164 291 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 EMP3P54852 163 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 STXBP1P61764 594 aaKnown RBP10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 SKP1P63208 163 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 CUL3Q13618 768 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 DDX39BQ13838 428 aaKnown RBP10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 SNTB1Q13884 538 aaKnown RBP10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 SQLEQ14534 574 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 ABRAXAS2Q15018 415 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 GSTA3Q16772 222 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 MEP1AQ16819 746 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 LSM12Q3MHD2 195 aaKnown RBP10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 SLC9B1Q4ZJI4 515 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 TMEM35AQ53FP2 167 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 KRTCAP3Q53RY4 240 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 SFT2D3Q587I9 215 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 SLC25A25Q6KCM7 469 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 PAPD4Q6PIY7 484 aaKnown RBP10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 CHSY3Q70JA7 882 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 PAGE2Q7Z2X7 111 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 CCDC71Q8IV32 467 aaPredicted RBP10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 FNDC5Q8NAU1 212 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 MFSD9Q8NBP5 474 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 KCT2Q8NC54 265 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 HUS1BQ8NHY5 278 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 QRFPRQ96P65 431 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 EBF4Q9BQW3 602 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 LIME1Q9H400 295 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 TUBB1Q9H4B7 451 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 LRTM1Q9HBL6 345 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 DMRT3Q9NQL9 472 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 TMEM45AQ9NWC5 275 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 ASIC5Q9NY37 505 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 LRFN1Q9P244 771 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 HEY2Q9UBP5 337 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 VPS29Q9UBQ0 182 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 ZFP69BQ9UJL9 534 aa10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 EIF3LQ9Y262 564 aaKnown RBP10.95□□□□□ -0.66
CSNK1E-212ENST00000494610 A0A1B0GTH9 108 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 E9PBE3 544 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 LSM1O15116 133 aaKnown RBP10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 OR1F1O43749 312 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 LCMT2O60294 686 aaKnown RBP10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 PRAMEF4O60810 478 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 PDE9AO76083 593 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 CD46P15529 392 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 DDX5P17844 614 aaKnown RBP10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 TPP2P29144 1249 aaPredicted RBP10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 SERPINB3P29508 390 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 AVPR1BP47901 424 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 MRPL19P49406 292 aaKnown RBP10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 HTR6P50406 440 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 RAP1GDS1P52306 607 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 OLR1P78380 273 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 RHAGQ02094 409 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 TFF3Q07654 80 aa10.94□□□□□ -0.66
CSNK1E-212ENST00000494610 ACSM2AQ08AH3 577 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms