RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 LYPLAL1Q5VWZ2 237 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 PTRHD1Q6GMV3 140 aaKnown RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 CNSTQ6PJW8 725 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 TTLL10Q6ZVT0 673 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 KCTD20Q7Z5Y7 419 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 SNX32Q86XE0 403 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 DCUN1D3Q8IWE4 304 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 GALNT12Q8IXK2 581 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 PM20D2Q8IYS1 436 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 GPR135Q8IZ08 494 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 MFSD4AQ8N468 514 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 OR2Y1Q8NGV0 311 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 OMA1Q96E52 524 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 REXO5Q96IC2 774 aaKnown RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 METTL2AQ96IZ6 378 aaKnown RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 ZNF285Q96NJ3 590 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 SPSB2Q99619 263 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 SMAD5Q99717 465 aaKnown RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 KIFC1Q9BW19 673 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 ZNF552Q9H707 407 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 SLC6A20Q9NP91 592 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 RPRD1BQ9NQG5 326 aaKnown RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 EIF2B3Q9NR50 452 aaKnown RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 DDX28Q9NUL7 540 aaKnown RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 P4HTMQ9NXG6 502 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 IFT80Q9P2H3 777 aaPredicted RBP7.72□□□□□ -1.17
HDAC6-234ENST00000493923 TXNDC16Q9P2K2 825 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 CTSFQ9UBX1 484 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 CFL2Q9Y281 166 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 MED16Q9Y2X0 877 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 SNX13Q9Y5W8 968 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 TEX264Q9Y6I9 313 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 ABCA12Q86UK0 2595 aa7.72□□□□□ -1.17
HDAC6-234ENST00000493923 IGKV1-8A0A0C4DH67 115 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 PNMA8CA0A1B0GUJ8 204 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 ARHGEF33A8MVX0 844 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 ANGPT2O15123 496 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 SNX4O95219 450 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 STATHP02808 62 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 JUNP05412 331 aaKnown RBP7.71□□□□□ -1.18
HDAC6-234ENST00000493923 GPIP06744 558 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 HBQ1P09105 142 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 PRKACAP17612 351 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 AGXTP21549 392 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 ALAS2P22557 587 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 NR4A1P22736 598 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 FASP25445 335 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 FOLR3P41439 243 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 NR4A2P43354 598 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 NPY2RP49146 381 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 PGGT1BP53609 377 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF45Q02386 682 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 CEACAM7Q14002 265 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 SSPNQ14714 243 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 ACAP2Q15057 778 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 NEDD8Q15843 81 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 NKG7Q16617 165 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 EIF2S3LQ2VIR3 472 aaKnown RBP7.71□□□□□ -1.18
HDAC6-234ENST00000493923 ESCO2Q56NI9 601 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 CRB2Q5IJ48 1285 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 DCAF10Q5QP82 559 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 MROH9Q5TGP6 573 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 GTF2IRD2BQ6EKJ0 949 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 FBXO42Q6P3S6 717 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF549Q6P9A3 640 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 SUSD1Q6UWL2 747 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 UNC5DQ6UXZ4 953 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 CHSY3Q70JA7 882 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 MED25Q71SY5 747 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 GTF2IRD2Q86UP8 949 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 RAB43Q86YS6 212 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 PLCZ1Q86YW0 608 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 DENND6AQ8IWF6 608 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 PRSS58Q8IYP2 241 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 CLIP4Q8N3C7 705 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 GALNT16Q8N428 558 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 FAM26EQ8N5C1 309 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 PPM1NQ8N819 430 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 OR7A2PQ8NGA2 310 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 OR2A1Q8NGT9 310 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 LHFPL5Q8TAF8 219 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 SETD6Q8TBK2 473 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 ASZ1Q8WWH4 475 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 LRTOMTQ8WZ04 291 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 HDAC2Q92769 488 aaKnown RBP7.71□□□□□ -1.18
HDAC6-234ENST00000493923 PROX1Q92786 737 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 CIDECQ96AQ7 238 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-234ENST00000493923 PPWD1Q96BP3 646 aaKnown RBP7.71□□□□□ -1.18
HDAC6-234ENST00000493923 CENPNQ96H22 339 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-234ENST00000493923 C10orf90Q96M02 699 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 SLC29A1Q99808 456 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 SOX17Q9H6I2 414 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-234ENST00000493923 CUTCQ9NTM9 273 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 ASF1BQ9NVP2 202 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 SMPD3Q9NY59 655 aaPredicted RBP7.71□□□□□ -1.18
HDAC6-234ENST00000493923 GPR83Q9NYM4 423 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 NDOR1Q9UHB4 597 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 FBXL4Q9UKA2 621 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 CRYL1Q9Y2S2 319 aa7.71□□□□□ -1.18
HDAC6-234ENST00000493923 ZNF451Q9Y4E5 1061 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms