RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 CFL2Q9Y281 166 aa9.13□□□□□ -0.95
NPHP3-209ENST00000493732 WDR37Q9Y2I8 494 aa9.13□□□□□ -0.95
NPHP3-209ENST00000493732 UGT2A1Q9Y4X1 527 aa9.13□□□□□ -0.95
NPHP3-209ENST00000493732 PEX16Q9Y5Y5 336 aa9.13□□□□□ -0.95
NPHP3-209ENST00000493732 TRBV4-1A0A0J9YWV2 114 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 GSAPA4D1B5 854 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 DUXAA6NLW8 204 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ZW10O43264 779 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 EMC8O43402 210 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ERI3O43414 337 aaKnown RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 PRICKLE3O43900 615 aaPredicted RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 NME6O75414 186 aaPredicted RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 OR12D1P0DN82 309 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 MYOGP15173 224 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 PORP16435 677 aaPredicted RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 GADD45AP24522 165 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ATP5A1P25705 553 aaKnown RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 POU1F1P28069 291 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 CSTF2P33240 577 aaKnown RBP eCLIP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 RPS26P62854 115 aaKnown RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 SLAMF1Q13291 335 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 KIAA0100Q14667 2235 aaKnown RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ZNF181Q2M3W8 571 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ATAD3BQ5T9A4 648 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 C12orf73Q69YU5 71 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 WASH2PQ6VEQ5 465 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 SZRD1Q7Z422 152 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ACOT4Q8N9L9 421 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 MFSD9Q8NBP5 474 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 OR2L3Q8NG85 312 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 OR9Q1Q8NGQ5 310 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 TMEM80Q96HE8 168 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 MGLLQ99685 303 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 APOOQ9BUR5 198 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 TRMT61BQ9BVS5 477 aaKnown RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 TRPM6Q9BX84 2022 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 TMEM121BQ9BXQ6 578 aaPredicted RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 NXF2Q9GZY0 626 aaKnown RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ABCG4Q9H172 646 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ANKRD19PQ9H560 264 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 SLC25A19Q9HC21 320 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ZDHHC4Q9NPG8 344 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 PRDM9Q9NQV7 894 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 RHCGQ9UBD6 479 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 REV1Q9UBZ9 1251 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 SLC13A4Q9UKG4 626 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ZFR2Q9UPR6 939 aaKnown RBP9.12□□□□□ -0.95
NPHP3-209ENST00000493732 KLHL20Q9Y2M5 609 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 IFT52Q9Y366 437 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 GPSM3Q9Y4H4 160 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ASB4Q9Y574 426 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 PCDHGA3Q9Y5H0 932 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 ZNF780BQ9Y6R6 833 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 NUMA1Q14980 2115 aa9.12□□□□□ -0.95
NPHP3-209ENST00000493732 IGKV1-8A0A0C4DH67 115 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 A0A1W2PQU0 124 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 METTL15A6NJ78 407 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 H3BN98 237 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 TOR1BO14657 336 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 RNGTTO60942 597 aaKnown RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 LGI1O95970 557 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 ACADMP11310 421 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 BMP4P12644 408 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 ALDH4A1P30038 563 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 NTSR1P30989 418 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 GDI1P31150 447 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 BCL6P41182 706 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 CD97P48960 835 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 NUDT6P53370 316 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 RPS15AP62244 130 aaKnown RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 PRKCDQ05655 676 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 RGS1Q08116 209 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 TARDBPQ13148 414 aaKnown RBP eCLIP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 C1DQ13901 141 aaKnown RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 LRRC32Q14392 662 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 MAPK11Q15759 364 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 RPE65Q16518 533 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 TBC1D25Q3MII6 688 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 SLC48A1Q6P1K1 146 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 DUS1LQ6P1R4 473 aaKnown RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 C19orf48Q6RUI8 117 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 TMEM184AQ6ZMB5 413 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 SPRED2Q7Z698 418 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 ZBTB46Q86UZ6 589 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 C7orf61Q8IZ16 206 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 ZNF784Q8NCA9 323 aaPredicted RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 OR14C36Q8NHC7 312 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 RPL3LQ92901 407 aaKnown RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 PRRC1Q96M27 445 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 MND1Q9BWT6 205 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 TEX12Q9BXU0 123 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 POLDIP3Q9BY77 421 aaKnown RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 CACYBPQ9HB71 228 aaKnown RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 PRDM7Q9NQW5 492 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 KLHL28Q9NXS3 571 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 CRNNQ9UBG3 495 aaPredicted RBP9.11□□□□□ -0.95
NPHP3-209ENST00000493732 MOSPD1Q9UJG1 213 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 KCNK6Q9Y257 313 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 PCDHGA4Q9Y5G9 962 aa9.11□□□□□ -0.95
NPHP3-209ENST00000493732 PMF1-BGLAPU3KQ54 211 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms