RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 OR7A17O14581 309 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 NADKO95544 446 aaPredicted RBP11.47□□□□□ -0.57
COL6A1-205ENST00000492851 AIFM1O95831 613 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 OTCP00480 354 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 GLI4P10075 376 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 IGFBP2P18065 325 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 MSX1P28360 303 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 MAGEA12P43365 314 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 XKP51811 444 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 FUT7Q11130 342 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 EBPQ15125 230 aaKnown RBP11.47□□□□□ -0.57
COL6A1-205ENST00000492851 CCNYL2Q5T2Q4 361 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 LYPD8Q6UX82 237 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 DGAT2L6Q6ZPD8 337 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 PACS2Q86VP3 889 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 LCA5Q86VQ0 697 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 GALNT12Q8IXK2 581 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 DMRTC2Q8IXT2 367 aaPredicted RBP11.47□□□□□ -0.57
COL6A1-205ENST00000492851 LRRC25Q8N386 305 aaPredicted RBP11.47□□□□□ -0.57
COL6A1-205ENST00000492851 MMGT1Q8N4V1 131 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 C17orf47Q8NEP4 570 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 SREK1Q8WXA9 508 aaKnown RBP11.47□□□□□ -0.57
COL6A1-205ENST00000492851 LRRC46Q96FV0 321 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 FMO2Q99518 471 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 DOHHQ9BU89 302 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 MRPL46Q9H2W6 279 aaKnown RBP11.47□□□□□ -0.57
COL6A1-205ENST00000492851 CXorf21Q9HAI6 301 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 BRF2Q9HAW0 419 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 SNX6Q9UNH7 406 aa11.47□□□□□ -0.57
COL6A1-205ENST00000492851 CHCHD2Q9Y6H1 151 aaPredicted RBP11.47□□□□□ -0.57
COL6A1-205ENST00000492851 NCOA6Q14686 2063 aaPredicted RBP11.47□□□□□ -0.57
COL6A1-205ENST00000492851 A0A087WUV0 522 aaPredicted RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 C1orf226A1L170 272 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 LRRC14BA6NHZ5 514 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 FAM90A27PA6NNH2 459 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 AHRRA9YTQ3 701 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 HRKO00198 91 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 PGRMC2O15173 223 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 ACSL3O95573 720 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 KLK1P06870 262 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 PORP16435 677 aaPredicted RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 NAGAP17050 411 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 DEKP35659 375 aaKnown RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 NR0B1P51843 470 aaKnown RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 TFF3Q07654 80 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 RPS6KA2Q15349 733 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 SLC25A35Q3KQZ1 300 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 C1orf185Q5T7R7 199 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 RIPPLY2Q5TAB7 128 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 CCDC71Q8IV32 467 aaPredicted RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 PM20D2Q8IYS1 436 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 PLD6Q8N2A8 252 aaKnown RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 METTL4Q8N3J2 472 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 C17orf53Q8N3J3 647 aaPredicted RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 OR10G3Q8NGC4 313 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 OR52B6Q8NGF0 335 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 NEIL3Q8TAT5 605 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 IFT81Q8WYA0 676 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 DIO2Q92813 273 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 MTBPQ96DY7 904 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF597Q96LX8 424 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 JSRP1Q96MG2 331 aaPredicted RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 CDK15Q96Q40 435 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 PAFAH2Q99487 392 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF559Q9BR84 538 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 C1QTNF3Q9BXJ4 246 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 UCK2Q9BZX2 261 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 OR10A5Q9H207 317 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 CDC42EP4Q9H3Q1 356 aaKnown RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 ZNF703Q9H7S9 590 aaPredicted RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 SEMA4BQ9NPR2 832 aaPredicted RBP11.46□□□□□ -0.57
COL6A1-205ENST00000492851 ALKBH4Q9NXW9 302 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 XPR1Q9UBH6 696 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 PCTPQ9UKL6 214 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 NPFFR2Q9Y5X5 522 aa11.46□□□□□ -0.57
COL6A1-205ENST00000492851 CSMD1Q96PZ7 3565 aa11.46□□□□□ -0.58
COL6A1-205ENST00000492851 NKX2-6A6NCS4 301 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 HSPB2A8KAH6 182 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 TRIM3O75382 744 aaPredicted RBP11.45□□□□□ -0.58
COL6A1-205ENST00000492851 PRKRAO75569 313 aaKnown RBP11.45□□□□□ -0.58
COL6A1-205ENST00000492851 SNRPAP09012 282 aaKnown RBP11.45□□□□□ -0.58
COL6A1-205ENST00000492851 CPMP14384 443 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 KRT15P19012 456 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 CSNK2A2P19784 350 aaPredicted RBP11.45□□□□□ -0.58
COL6A1-205ENST00000492851 TAC1P20366 129 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 NT5EP21589 574 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 MAPK12P53778 367 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 DCAF7P61962 342 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 TRA2BP62995 288 aaKnown RBP11.45□□□□□ -0.58
COL6A1-205ENST00000492851 HSPB2Q16082 182 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 PRAMEF20Q5VT98 475 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 ADGRD1Q6QNK2 874 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 CDH24Q86UP0 819 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 ZNF615Q8N8J6 731 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 ZNF441Q8N8Z8 693 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 OR4F6Q8NGB9 312 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 DTNBP1Q96EV8 351 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 FAIM2Q9BWQ8 316 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 ANGPTL4Q9BY76 406 aa11.45□□□□□ -0.58
COL6A1-205ENST00000492851 CNOT11Q9UKZ1 510 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms