RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, human

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-215	ENST00000492417	C19orf25	Q9UFG5	118 aa	Predicted RBP	4.25	□□□□□ -1.73
TRA2B-215	ENST00000492417	ADGRE2	Q9UHX3	823 aa		4.25	□□□□□ -1.73
TRA2B-215	ENST00000492417	ANAPC2	Q9UJX6	822 aa		4.25	□□□□□ -1.73
TRA2B-215	ENST00000492417	PCDHGA5	Q9Y5G8	931 aa		4.25	□□□□□ -1.73
TRA2B-215	ENST00000492417	PIKFYVE	Q9Y2I7	2098 aa		4.25	□□□□□ -1.73
TRA2B-215	ENST00000492417	NLRC5	Q86WI3	1866 aa		4.25	□□□□□ -1.73
TRA2B-215	ENST00000492417	DOCK9	Q9BZ29	2069 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TMX2-CTNND1	H3BSU7	103 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	E2F3	O00716	465 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TNFSF14	O43557	240 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	NUDT21	O43809	227 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TPST2	O60704	377 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	OPN1SW	P03999	348 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	RPS17	P08708	135 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	CLK3	P49761	638 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SLC16A1	P53985	500 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PLGLB1	Q02325	96 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	CYP27C1	Q4G0S4	372 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	MANEA	Q5SRI9	462 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TMEM107	Q6UX40	140 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	DEF8	Q6ZN54	512 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	CHMP1B	Q7LBR1	199 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	KRT74	Q7RTS7	529 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PIGW	Q7Z7B1	504 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	NRROS	Q86YC3	692 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	NLGN4X	Q8N0W4	816 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	OR2L5	Q8NG80	312 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	OR2A1	Q8NGT9	310 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	OR51Q1	Q8NH59	317 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SUN3	Q8TAQ9	357 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	DNASE2B	Q8WZ79	361 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SLC35G5	Q96KT7	338 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	C3orf30	Q96M34	536 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SPNS1	Q9H2V7	528 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ARMC7	Q9H6L4	198 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	KCNK13	Q9HB14	408 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	DMRT3	Q9NQL9	472 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ANKRD10	Q9NXR5	420 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ING3	Q9NXR8	418 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ZNF224	Q9NZL3	707 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ZNF282	Q9UDV7	671 aa	Predicted RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TMCC3	Q9ULS5	477 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SRPK3	Q9UPE1	567 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PLXNA3	P51805	1871 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	OTOGL	Q3ZCN5	2332 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ALPK3	Q96L96	1907 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TRBC2	A0A5B9	178 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	POM121C	A8CG34	1229 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	GFY	I3L273	518 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SDHD	O14521	159 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	B4GAT1	O43505	415 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PRKN	O60260	465 aa	Predicted RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	NOS1AP	O75052	506 aa	Predicted RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PGR	P06401	933 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	FOLR1	P15328	257 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	GTF2E2	P29084	291 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	NUP62	P37198	522 aa	Predicted RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	CCL11	P51671	97 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	FOXL2	P58012	376 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SMU1	Q2TAY7	513 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ATG9B	Q674R7	924 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TMEM151B	Q8IW70	566 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PEX5L	Q8IYB4	626 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	CLECL1	Q8IZS7	167 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	DTWD1	Q8N5C7	304 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	KBTBD8	Q8NFY9	601 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	OR8H1	Q8NGG4	311 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	NUDT8	Q8WV74	236 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	MAPKAP1	Q9BPZ7	522 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SLC35A5	Q9BS91	424 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	UGT2B28	Q9BY64	529 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	CADM1	Q9BY67	442 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ACPT	Q9BZG2	426 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	C20orf27	Q9GZN8	174 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PELI2	Q9HAT8	420 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	APMAP	Q9HDC9	416 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PLSCR2	Q9NRY7	297 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TAS2R1	Q9NYW7	299 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	GPRC5B	Q9NZH0	403 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	KLRF1	Q9NZS2	232 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SEC14L3	Q9UDX4	400 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	RAB26	Q9ULW5	256 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PRPF19	Q9UMS4	504 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SH2B3	Q9UQQ2	575 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	AP1M2	Q9Y6Q5	423 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	WDR87	Q6ZQQ6	2873 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	WASHC1	A8K0Z3	465 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	OR7A17	O14581	309 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	RRP8	O43159	456 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	SRPX2	O60687	465 aa	Predicted RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	EED	O75530	441 aa	Known RBP	4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TGDS	O95455	350 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TSPAN12	O95859	305 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	HBQ1	P09105	142 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	LAMP1	P11279	417 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	NCK1	P16333	377 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	IL7R	P16871	459 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	TACR1	P25103	407 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	PEX2	P28328	305 aa		4.24	□□□□□ -1.73
TRA2B-215	ENST00000492417	ETV4	P43268	484 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms