RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 RPRMLQ8N4K4 120 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 CHDHQ8NE62 594 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 OR10Q1Q8NGQ4 319 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 KIF18AQ8NI77 898 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 RHEBL1Q8TAI7 183 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.42□□□□□ -1.068e-7■■■■■ 32.1
HDAC3-212ENST00000492407 LZICQ8WZA0 190 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 TP53INP1Q96A56 240 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 PPP1R14BQ96C90 147 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 REPS1Q96D71 796 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 SPACA9Q96E40 222 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 SECISBP2Q96T21 854 aaKnown RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 KRT12Q99456 494 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 ERP44Q9BS26 406 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 LIN28AQ9H9Z2 209 aaKnown RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 SMYD2Q9NRG4 433 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 LYARQ9NX58 379 aaKnown RBP8.42□□□□□ -1.06
HDAC3-212ENST00000492407 OPTCQ9UBM4 332 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 Q9UFV3 132 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 PCDHGA11Q9Y5H2 935 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 PCNX1Q96RV3 2341 aa8.42□□□□□ -1.06
HDAC3-212ENST00000492407 NF1P21359 2839 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 A0A0G2JMM0 328 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 IQANK1A0A1B0GTG1 560 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ATP6AP2A0A1C7CYW4 349 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 A0A1W2PPB8 328 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 A0A1W2PRS3 328 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 TCRBV9S1A1TA0A576 114 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 KIR3DP1A8MWS1 328 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 CAPN14A8MX76 684 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 H0YIV9 168 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 TP53I11O14683 189 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 PROM1O43490 865 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 FGF17O60258 216 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF354AO60765 605 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 CDH16O75309 829 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 SKAP2O75563 359 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 CTAG2O75638 210 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ATP6AP2O75787 350 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 SNX4O95219 450 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 NADKO95544 446 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 GPR75O95800 540 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 SLC35E2BP0CK96 405 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 SLC35E2P0CK97 266 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 CCL3P10147 92 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 SSTR1P30872 391 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 DNAJA1P31689 397 aaKnown RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 TIMP3P35625 211 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 DNASE1L1P49184 302 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ART1P52961 327 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ARPC4P59998 168 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 RPP38P78345 283 aaKnown RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 TNFRSF17Q02223 184 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ASPHQ12797 758 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 MYBPHQ13203 477 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 C10orf62Q5T681 223 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ADNP2Q6IQ32 1131 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ALKBH2Q6NS38 261 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ADGRD1Q6QNK2 874 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ARSKQ6UWY0 536 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 LYPD8Q6UX82 237 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 C3orf62Q6ZUJ4 267 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 SLC29A4Q7RTT9 530 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 TBC1D1Q86TI0 1168 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 TMEM200AQ86VY9 491 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 C9orf40Q8IXQ3 194 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 TAGAPQ8N103 731 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 SPATA6LQ8N4H0 392 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF321PQ8N8H1 164 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 C17orf47Q8NEP4 570 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 OR5M9Q8NGP3 310 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 NEIL3Q8TAT5 605 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 SLC35B4Q969S0 331 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 POM121Q96HA1 1249 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ATOH8Q96SQ7 321 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 NAPGQ99747 312 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 TMUB1Q9BVT8 246 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 OSBPL10Q9BXB5 764 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF703Q9H7S9 590 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 DDX31Q9H8H2 851 aaKnown RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 CAB39LQ9H9S4 337 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 WDR41Q9HAD4 459 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 BATF3Q9NR55 127 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 ZNF629Q9UEG4 869 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 SNX24Q9Y343 169 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 TMED5Q9Y3A6 229 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 L3MBTL1Q9Y468 752 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 CHCHD2Q9Y6H1 151 aaPredicted RBP8.41□□□□□ -1.06
HDAC3-212ENST00000492407 GTF3C1Q12789 2109 aa8.41□□□□□ -1.06
HDAC3-212ENST00000492407 C2CD3Q4AC94 2353 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 CACNA1CQ13936 2221 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 LINC00854A0A1B0GVQ3 168 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 CXorf49A8MYA2 514 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 FOXE1O00358 373 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 DVL2O14641 736 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 PHGDHO43175 533 aaKnown RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 AHCYL1O43865 530 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 TRIM3O75382 744 aaPredicted RBP8.4□□□□□ -1.06
HDAC3-212ENST00000492407 B3GALNT1O75752 331 aa8.4□□□□□ -1.06
HDAC3-212ENST00000492407 EPPINO95925 133 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms