RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ERVK-6Q9BXR3 956 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 SHCBP1LQ9BZQ2 653 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 WWTR1Q9GZV5 400 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 VPS11Q9H270 941 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 ELOVL6Q9H5J4 265 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 ZNF703Q9H7S9 590 aaPredicted RBP8.07□□□□□ -1.12
NUP50-217ENST00000491860 NOL11Q9H8H0 719 aaKnown RBP8.07□□□□□ -1.12
NUP50-217ENST00000491860 LIN28AQ9H9Z2 209 aaKnown RBP8.07□□□□□ -1.12
NUP50-217ENST00000491860 CXorf21Q9HAI6 301 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 BRF2Q9HAW0 419 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 PNPLA3Q9NST1 481 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 TUBA8Q9NY65 449 aaPredicted RBP8.07□□□□□ -1.12
NUP50-217ENST00000491860 CPSF2Q9P2I0 782 aaKnown RBP8.07□□□□□ -1.12
NUP50-217ENST00000491860 ZNF180Q9UJW8 692 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 SNX6Q9UNH7 406 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 ERVK-19Q9WJR5 959 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 STK38LQ9Y2H1 464 aa8.07□□□□□ -1.12
NUP50-217ENST00000491860 NINQ8N4C6 2090 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 MYOCOSA0A1B0GUC4 107 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 ATP6AP2A0A1C7CYW4 349 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 C1orf226A1L170 272 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 CCDC151A5D8V7 595 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 PINLYPA6NC86 204 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 FAM90A27PA6NNH2 459 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 HSPB2A8KAH6 182 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 AHRRA9YTQ3 701 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 ATP6AP2O75787 350 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 BCAS2O75934 225 aaPredicted RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 TOXO94900 526 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 NADKO95544 446 aaPredicted RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 AIFM1O95831 613 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 HSD3B1P14060 373 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 NAGAP17050 411 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 IGFBP2P18065 325 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 KRT15P19012 456 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 TAC1P20366 129 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 HSD3B2P26439 372 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 DEKP35659 375 aaKnown RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 MAGEA12P43365 314 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 DNASE1L1P49184 302 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 NUP107P57740 925 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 DCAF7P61962 342 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 TRA2BP62995 288 aaKnown RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 IRF9Q00978 393 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 TFF3Q07654 80 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 FUT7Q11130 342 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 CDSNQ15517 529 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 HSPB2Q16082 182 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 CCNYL2Q5T2Q4 361 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 RIPPLY2Q5TAB7 128 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 ZNF585AQ6P3V2 769 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 TMEM81Q6P7N7 255 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 SCIMPQ6UWF3 145 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 MILR1Q7Z6M3 343 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 CDH24Q86UP0 819 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 PACS2Q86VP3 889 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 DMRTC2Q8IXT2 367 aaPredicted RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 LRRC25Q8N386 305 aaPredicted RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 PTGR2Q8N8N7 351 aaPredicted RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 SLC44A1Q8WWI5 657 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 PPWD1Q96BP3 646 aaKnown RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 MTBPQ96DY7 904 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 MRRFQ96E11 262 aaKnown RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 GPR78Q96P69 363 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 FMO2Q99518 471 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 ZNF559Q9BR84 538 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 TTYH2Q9BSA4 534 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 LRRC1Q9BTT6 524 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 FAIM2Q9BWQ8 316 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 SORBS1Q9BX66 1292 aaKnown RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 ZNF717Q9BY31 904 aaPredicted RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 MRPL46Q9H2W6 279 aaKnown RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 NINJ2Q9NZG7 142 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 FOXD3Q9UJU5 478 aaPredicted RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 ITGB1BP2Q9UKP3 347 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 RNF11Q9Y3C5 154 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 CHCHD2Q9Y6H1 151 aaPredicted RBP8.06□□□□□ -1.12
NUP50-217ENST00000491860 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.06□□□□□ -1.12
NUP50-217ENST00000491860 ARHGAP21Q5T5U3 1957 aa8.06□□□□□ -1.12
NUP50-217ENST00000491860 A0A087WUV0 522 aaPredicted RBP8.05□□□□□ -1.12
NUP50-217ENST00000491860 A0A0G2JMM0 328 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 A0A1W2PPB8 328 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 A0A1W2PR48 441 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 A0A1W2PRS3 328 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 ESYT3A0FGR9 886 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 HMX2A2RU54 273 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 KIR3DP1A8MWS1 328 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 G3V3Y1 287 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 KIF2AO00139 706 aaPredicted RBP8.05□□□□□ -1.12
NUP50-217ENST00000491860 OR7A17O14581 309 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 DVL2O14641 736 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 ACOX3O15254 700 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 TMPRSS11DO60235 418 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 EEDO75530 441 aaKnown RBP8.05□□□□□ -1.12
NUP50-217ENST00000491860 URI1O94763 535 aaPredicted RBP8.05□□□□□ -1.12
NUP50-217ENST00000491860 SIX3O95343 332 aaPredicted RBP8.05□□□□□ -1.12
NUP50-217ENST00000491860 GLI4P10075 376 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 CPMP14384 443 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 CD1EP15812 388 aa8.05□□□□□ -1.12
NUP50-217ENST00000491860 PORP16435 677 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms