RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 G3V2T6 193 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 LCMT2O60294 686 aaKnown RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 CCNDBP1O95273 360 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 STATHP02808 62 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 KLK3P07288 261 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 GDF5P43026 501 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 OR4D2P58180 307 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 CSNK1G2P78368 415 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ZNF846Q147U1 533 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ATP6AP1LQ52LC2 224 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 CAPN13Q6MZZ7 669 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 FAM198BQ6UWH4 519 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 LINC00299Q6ZSB3 139 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ZBTB46Q86UZ6 589 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 IGFN1Q86VF2 1251 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 SPARTQ8N0X7 666 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 TMCO5AQ8N6Q1 288 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 PROKR1Q8TCW9 393 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 STARD8Q92502 1023 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 TTC9Q92623 222 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 ESAMQ96AP7 390 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 RHBDF1Q96CC6 855 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 SLC7A5P2Q9GIP4 190 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 WDR12Q9GZL7 423 aaKnown RBP8.88□□□□□ -0.99
BRCA1-219ENST00000491747 SPNS1Q9H2V7 528 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 PIF1Q9H611 641 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 SLC22A11Q9NSA0 550 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 TMEM184CQ9NVA4 438 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 SNX7Q9UNH6 387 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 PCDHGA6Q9Y5G7 932 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 SNX5Q9Y5X3 404 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 AP1M2Q9Y6Q5 423 aa8.88□□□□□ -0.99
BRCA1-219ENST00000491747 FEZF1A0PJY2 475 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 TTC36A6NLP5 189 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 UPK1AO00322 258 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 P2RX6O15547 441 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 SRPX2O60687 465 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 CNOT3O75175 753 aaKnown RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 EIF2S1P05198 315 aaKnown RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ANXA5P08758 320 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 PRKAR1AP10644 381 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 MEF2AQ02078 507 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 TOP3AQ13472 1001 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 SLC9A5Q14940 896 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 RBBP7Q16576 425 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 HKDC1Q2TB90 917 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 LINC00303Q3SY05 128 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 CATSPEREQ5SY80 951 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 TTLL10Q6ZVT0 673 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ADCK2Q7Z695 626 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ADAMTSL2Q86TH1 951 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 SYVN1Q86TM6 617 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 THOC6Q86W42 341 aaKnown RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ARHGEF39Q8N4T4 335 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ABHD11Q8NFV4 315 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 NEIL2Q969S2 332 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 EGFL8Q99944 293 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 MACROD1Q9BQ69 325 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ACTL8Q9H568 366 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 TMEM165Q9HC07 324 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 INIPQ9NRY2 104 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 CUTCQ9NTM9 273 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 BAG5Q9UL15 447 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 SLC22A14Q9Y267 594 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 C21orf140B9A014 251 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 KCNH1O95259 989 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 HBQ1P09105 142 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ALAS2P22557 587 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 SLC6A12P48065 614 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ERV3-1Q14264 604 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 PRTGQ2VWP7 1150 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 TCTE1Q5JU00 501 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 C6orf136Q5SQH8 315 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 C6orf141Q5SZD1 244 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 SLC2A7Q6PXP3 512 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 GPRIN3Q6ZVF9 776 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 VN1R4Q7Z5H5 301 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 C17orf64Q86WR6 236 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 GPSM1Q86YR5 675 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 SVOPLQ8N434 492 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 METTL27Q8N6F8 245 aaPredicted RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ZSCAN1Q8NBB4 408 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 MINDY2Q8NBR6 621 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ZNF740Q8NDX6 193 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ATL1Q8WXF7 558 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 S100ZQ8WXG8 99 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 TAMM41Q96BW9 452 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 C10orf90Q96M02 699 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 RBM4BQ9BQ04 359 aaKnown RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 NDC1Q9BTX1 674 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 RBM4Q9BWF3 364 aaKnown RBP8.87□□□□□ -0.99
BRCA1-219ENST00000491747 FUNDC2Q9BWH2 189 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 PCBD2Q9H0N5 130 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 TOR3AQ9H497 397 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 ARMC7Q9H6L4 198 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 FAM118AQ9NWS6 357 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 DNAJB9Q9UBS3 223 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 DAPK2Q9UIK4 370 aa8.87□□□□□ -0.99
BRCA1-219ENST00000491747 PCTPQ9UKL6 214 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms