RNA–Protein interactions for RNA: ENST00000491402.5

VCPKMT-204, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,793 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-204ENST00000491402 MSRB3Q8IXL7 192 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 PPWD1Q96BP3 646 aaKnown RBP20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 RBM18Q96H35 190 aaKnown RBP20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 PHF12Q96QT6 1004 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 CGREF1Q99674 301 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 TMEM121BQ9BXQ6 578 aaPredicted RBP20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 NDE1Q9NXR1 346 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 C3orf18Q9UK00 162 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 CROTQ9UKG9 612 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 VPS4AQ9UN37 437 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 SNX8Q9Y5X2 465 aa20.35■□□□□ 0.85
VCPKMT-204ENST00000491402 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 RAD1O60671 282 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 ZCCHC18P0CG32 403 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 TCN2P20062 427 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 PTPN4P29074 926 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 STT3AP46977 705 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 PGAM4Q8N0Y7 254 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 TRIML2Q8N7C3 387 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 ENDOVQ8N8Q3 282 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 DGAT2Q96PD7 388 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 GPATCH1Q9BRR8 931 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 CRB3Q9BUF7 120 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 CCDC86Q9H6F5 360 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 ACSL6Q9UKU0 697 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 APC2O95996 2303 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 C1QTNF9BB2RNN3 333 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 GYG2O15488 501 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 CD63P08962 238 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 C1QTNF9P0C862 333 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 NT5EP21589 574 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 SOAT1P35610 550 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 STAT5AP42229 794 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 FAM69BQ5VUD6 431 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 TMEM107Q6UX40 140 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 C16orf89Q6UX73 402 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 DGAT2L6Q6ZPD8 337 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 DEFB107AQ8IZN7 70 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 C7orf57Q8NEG2 295 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 OR2Y1Q8NGV0 311 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 AURKBQ96GD4 344 aaPredicted RBP20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 PELOQ9BRX2 385 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 BTBD10Q9BSF8 475 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 SEMA3GQ9NS98 782 aa20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 PTRH2Q9Y3E5 179 aaKnown RBP20.34■□□□□ 0.85
VCPKMT-204ENST00000491402 IFNA16P05015 189 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 CYC1P08574 325 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 RAB40ALP0C0E4 278 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 MC3RP41968 323 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 EMP2P54851 167 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 MRPS35P82673 323 aaKnown RBP20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 PRICKLE4Q2TBC4 344 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 ZNF628Q5EBL2 1059 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 FAAH2Q6GMR7 532 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 LANCL3Q6ZV70 420 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 CLEC4FQ8N1N0 589 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 OR5AK3PQ8NH89 298 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 ZNF675Q8TD23 568 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 KAT2AQ92830 837 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 FGF11Q92914 225 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 ELP4Q96EB1 424 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 ANKRD27Q96NW4 1050 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 HOPXQ9BPY8 73 aaPredicted RBP20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 SLC35A5Q9BS91 424 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 TRIM8Q9BZR9 551 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 LRMDAQ9H2I8 198 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 PADI2Q9Y2J8 665 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 ACACAQ13085 2346 aa20.33■□□□□ 0.84
VCPKMT-204ENST00000491402 SYNDIG1LA6NDD5 238 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 ALOX12BO75342 701 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 SLC6A2P23975 617 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 SOX18P35713 384 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 PSME3P61289 254 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 NANOGP8Q6NSW7 305 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 RIT1Q92963 219 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 NANOGQ9H9S0 305 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 CXorf21Q9HAI6 301 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 PNO1Q9NRX1 252 aaKnown RBP20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 MAT2BQ9NZL9 334 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 CELSR3Q9NYQ7 3312 aa20.32■□□□□ 0.84
VCPKMT-204ENST00000491402 PLOD2O00469 737 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 SLITRK5O94991 958 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 C1QCP02747 245 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 UMODP07911 640 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 UQCRC2P22695 453 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 GALNSP34059 522 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 TGIF1Q15583 401 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 DNAL1Q4LDG9 190 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 TMEM64Q6YI46 380 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 ZNF771Q7L3S4 317 aaPredicted RBP20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 DTX1Q86Y01 620 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 GALNT12Q8IXK2 581 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 OR7G2Q8NG99 324 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 ZFP90Q8TF47 636 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 METTL21AQ8WXB1 218 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 CTHRC1Q96CG8 243 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 FAM120BQ96EK7 910 aaKnown RBP20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 TPT1P8Q9HAU6 139 aa20.31■□□□□ 0.84
VCPKMT-204ENST00000491402 SPAG4Q9NPE6 437 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 348.1 ms