RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 NPIPA3F8WFD2 350 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 SUSD5O60279 629 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 HCN1O60741 890 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 GLRA3O75311 464 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 SLU7O95391 586 aaKnown RBP15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 CSNK2A2P19784 350 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 CCT5P48643 541 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 CDH13P55290 713 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 ADORA2A-AS1P86434 159 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 TRAF3Q13114 568 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 CCDC153Q494R4 210 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 GPRIN3Q6ZVF9 776 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 PACS2Q86VP3 889 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 TICAM1Q8IUC6 712 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 C9orf40Q8IXQ3 194 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 METTL4Q8N3J2 472 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 OR52N2Q8NGI0 321 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF483Q8TF39 744 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 CHTF18Q8WVB6 975 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 JSRP1Q96MG2 331 aaPredicted RBP15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 DOHHQ9BU89 302 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 WWTR1Q9GZV5 400 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 ZDHHC11Q9H8X9 412 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 ZFP64Q9NPA5 681 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 QPCTLQ9NXS2 382 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 MID2Q9UJV3 735 aa15.3■□□□□ 0.04
PDLIM2-217ENST00000491330 ATP6AP2A0A1C7CYW4 349 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 FOXO6A8MYZ6 492 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 G3V3Y1 287 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 CRCPO75575 148 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 ERAL1O75616 437 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 ATP6AP2O75787 350 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 BCAS2O75934 225 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 SNX4O95219 450 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 NUDT17P0C025 328 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 CPMP14384 443 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 IMPDH1P20839 514 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 CHRNB4P30926 498 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 HSD17B3P37058 310 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 MASP1P48740 699 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 ALDH9A1P49189 494 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 PKNOX1P55347 436 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 SLC37A1P57057 533 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 CSTF3Q12996 717 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 HEPACAMQ14CZ8 416 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF791Q3KP31 576 aaPredicted RBP15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 GXYLT1Q4G148 440 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 C3P1Q6ZMU1 363 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 COMMD6Q7Z4G1 85 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 SRRM1Q8IYB3 904 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 TMEM151AQ8N4L1 468 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 OR10Q1Q8NGQ4 319 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 PAQR8Q8TEZ7 354 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 MZB1Q8WU39 189 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 DIO2Q92813 273 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 LRRC46Q96FV0 321 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 NSUN5Q96P11 429 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 SECISBP2Q96T21 854 aaKnown RBP15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 BRINP2Q9C0B6 783 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 ANKZF1Q9H8Y5 726 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 CXorf21Q9HAI6 301 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 ZBTB26Q9HCK0 441 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 KCNJ16Q9NPI9 418 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 PLSCR2Q9NRY7 297 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 GRID1Q9ULK0 1009 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 ZGRF1Q86YA3 2104 aa15.29■□□□□ 0.04
PDLIM2-217ENST00000491330 TRGV5A0A0B4J1U4 118 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 GNG14A0A1W2PPG7 69 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 PGRMC2O15173 223 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 WDR1O75083 606 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 PRKRAO75569 313 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 PDYNP01213 254 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 ENO1P06733 434 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 FBXO45P0C2W1 286 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 GABRA1P14867 456 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 SSTR2P30874 369 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 MAGEA5P43359 124 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 GSTM5P46439 218 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 DNASE1L1P49184 302 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 NR0B1P51843 470 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 ACSM2AQ08AH3 577 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 EBPQ15125 230 aaKnown RBP15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 RPS6KA2Q15349 733 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 HYAL4Q2M3T9 481 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 SPIN4Q56A73 249 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 CFAP157Q5JU67 520 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 ACSM2BQ68CK6 577 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF585AQ6P3V2 769 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 VWA5B2Q8N398 1253 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 FBXW8Q8N3Y1 598 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 TMEM251Q8N6I4 163 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 CDYL2Q8N8U2 506 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 C17orf47Q8NEP4 570 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 RDH11Q8TC12 318 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 KLHL29Q96CT2 875 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF597Q96LX8 424 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 ZNF717Q9BY31 904 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 SHCBP1LQ9BZQ2 653 aa15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 ROPN1BQ9BZX4 212 aaPredicted RBP15.28■□□□□ 0.04
PDLIM2-217ENST00000491330 OR10A5Q9H207 317 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms