RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 FGF17O60258 216 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 OR10H2O60403 315 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 TBX6O95947 436 aaPredicted RBP12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 HIST1H2AGP0C0S8 130 aaPredicted RBP12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 ITGA2P17301 1181 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 HIST1H2ADP20671 130 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 ZNF10P21506 573 aaPredicted RBP12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 GMPRP36959 345 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 MAGEA1P43355 309 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 STT3AP46977 705 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 NPY2RP49146 381 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 CLDN18P56856 261 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 KLF1Q13351 362 aaPredicted RBP12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 EBPQ15125 230 aaKnown RBP12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 ADAM5Q6NVV9 412 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 OR2L5Q8NG80 312 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 OR10H5Q8NGA6 315 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 FBXL20Q96IG2 436 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 HIST1H2AHQ96KK5 128 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 DGAT2Q96PD7 388 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 HIST1H2AJQ99878 128 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 MAPKAP1Q9BPZ7 522 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 H2AFJQ9BTM1 129 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 NTMT1Q9BV86 223 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 COPS7BQ9H9Q2 264 aaPredicted RBP12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 BARX1Q9HBU1 254 aaPredicted RBP12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 SERHLQ9NQF3 203 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 ABHD10Q9NUJ1 306 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 WWOXQ9NZC7 414 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 IFNKQ9P0W0 207 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 RNF112Q9ULX5 631 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 SOX13Q9UN79 622 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 DLGAP4Q9Y2H0 992 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 DYRK1BQ9Y463 629 aa12.34□□□□□ -0.43
EXOSC3-207ENST00000490516 IQANK1A0A1B0GTG1 560 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 A0A1W2PP18 115 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 SLC22A20A6NK97 555 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 TCF21O43680 179 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 GUCA1CO95843 209 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 STIP1P31948 543 aaKnown RBP12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 GFRA1P56159 465 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 HERVK_113P63132 956 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 ERVK-8P63133 956 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 TIAL1Q01085 375 aaKnown RBP eCLIP12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 DEFA6Q01524 100 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 RCN2Q14257 317 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 OR2A2Q6IF42 318 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 ALKBH2Q6NS38 261 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 TRIM40Q6P9F5 258 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 ABHD17CQ6PCB6 329 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 RNF111Q6ZNA4 994 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 PRR22Q8IZ63 422 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 TAGAPQ8N103 731 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 FBXL8Q96CD0 374 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 ZMYND19Q96E35 227 aaPredicted RBP12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 ERVK-6Q9BXR3 956 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 REXO4Q9GZR2 422 aaKnown RBP12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 TRMT6Q9UJA5 497 aaKnown RBP12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 ERVK-19Q9WJR5 959 aa12.33□□□□□ -0.44
EXOSC3-207ENST00000490516 SERINC4A6NH21 518 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 CDC7O00311 574 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 CLOCKO15516 846 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 EMC8O43402 210 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 CD8AP01732 235 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 ZSCAN5DPP0CG00 497 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 CD8BP10966 210 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 PPP3CBP16298 524 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 ZNF708P17019 499 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 SLC37A1P57057 533 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 IGLV3-21P80748 117 aaPredicted RBP12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 SQLEQ14534 574 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 ZNF267Q14586 743 aaPredicted RBP12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 PGGHGQ32M88 737 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 LRRC8EQ6NSJ5 796 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 THOC6Q86W42 341 aaKnown RBP12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 IFNEQ86WN2 208 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 MYO1HQ8N1T3 1032 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 DEPDC4Q8N2C3 294 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 GPATCH11Q8N954 259 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 FIG4Q92562 907 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 PHACTR1Q9C0D0 580 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 OR2B2Q9GZK3 357 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 MANSC1Q9H8J5 431 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 PRDM7Q9NQW5 492 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 KCNS2Q9ULS6 477 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 SLC22A14Q9Y267 594 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 RNF115Q9Y4L5 304 aa12.32□□□□□ -0.44
EXOSC3-207ENST00000490516 CAPN14A8MX76 684 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 DYRK3O43781 588 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 HAUS5O94927 633 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 CLPSP04118 112 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 SLC1A2P43004 574 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 RGS4P49798 205 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 NUDT6P53370 316 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 PCDH1Q08174 1060 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 SETDB1Q15047 1291 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 OASLQ15646 514 aaKnown RBP12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 CYP1B1Q16678 543 aa12.31□□□□□ -0.44
EXOSC3-207ENST00000490516 ADPRMQ3LIE5 342 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms