RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 SEMA3DO95025 777 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 CLDN9O95484 217 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 NADKO95544 446 aaPredicted RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 AIFM1O95831 613 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 HOXD4P09016 255 aaPredicted RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 SLC35E2P0CK97 266 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 GLI4P10075 376 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 GABRA1P14867 456 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 IGFBP2P18065 325 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 GALNSP34059 522 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 BSGP35613 385 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 NEK2P51955 445 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 CCNG1P51959 295 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 SLC7A5Q01650 507 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 GUCY2DQ02846 1103 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 TFF3Q07654 80 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 EBPQ15125 230 aaKnown RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 TBCELQ5QJ74 424 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 CES4AQ5XG92 561 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 TTC19Q6DKK2 380 aaPredicted RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 OR52E8Q6IFG1 317 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 MRM1Q6IN84 353 aaKnown RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 METTL2BQ6P1Q9 378 aaKnown RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 DGAT2L6Q6ZPD8 337 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 TAOK1Q7L7X3 1001 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 TMEM200AQ86VY9 491 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 DMRTC2Q8IXT2 367 aaPredicted RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 PTGR2Q8N8N7 351 aaPredicted RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 L3MBTL4Q8NA19 623 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 OR10G3Q8NGC4 313 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 SERPINI1Q99574 410 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 DOHHQ9BU89 302 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 ZNF717Q9BY31 904 aaPredicted RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 ZNF703Q9H7S9 590 aaPredicted RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 NOL11Q9H8H0 719 aaKnown RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 DDX31Q9H8H2 851 aaKnown RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 SH2D2AQ9NP31 389 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 SEMA4BQ9NPR2 832 aaPredicted RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 PSD3Q9NYI0 1048 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 AHSPQ9NZD4 102 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 MTRF1LQ9UGC7 380 aaKnown RBP10.36□□□□□ -0.75
DUBR-204ENST00000490441 KCNN3Q9UGI6 736 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 TMCO1Q9UM00 188 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 RNF11Q9Y3C5 154 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 ASB4Q9Y574 426 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 FAM215AQ9Y5M1 114 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 IKBKGQ9Y6K9 419 aa10.36□□□□□ -0.75
DUBR-204ENST00000490441 HIVEP1P15822 2718 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 AKAP9Q99996 3911 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 C2orf92A0A1B0GVN3 265 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 A0A1W2PR48 441 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 SMIM24O75264 130 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 ZWINTO95229 277 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 SIX3O95343 332 aaPredicted RBP10.35□□□□□ -0.75
DUBR-204ENST00000490441 GBAP04062 536 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 ALDOAP04075 364 aaKnown RBP10.35□□□□□ -0.75
DUBR-204ENST00000490441 INHBAP08476 426 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 RBP1P09455 135 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 GDF1P27539 372 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 PIK3R1P27986 724 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 TMED10P49755 219 aaKnown RBP10.35□□□□□ -0.75
DUBR-204ENST00000490441 NRG3P56975 720 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 SLC37A1P57057 533 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 RPP38P78345 283 aaKnown RBP10.35□□□□□ -0.75
DUBR-204ENST00000490441 IFT88Q13099 833 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 SLC25A35Q3KQZ1 300 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 TECRLQ5HYJ1 363 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 C10orf62Q5T681 223 aaPredicted RBP10.35□□□□□ -0.75
DUBR-204ENST00000490441 TMEM198Q66K66 360 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 PAGE2Q7Z2X7 111 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 ZNF572Q7Z3I7 529 aaPredicted RBP10.35□□□□□ -0.75
DUBR-204ENST00000490441 WDR53Q7Z5U6 358 aaPredicted RBP10.35□□□□□ -0.75
DUBR-204ENST00000490441 GALNT12Q8IXK2 581 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 C17orf53Q8N3J3 647 aaPredicted RBP10.35□□□□□ -0.75
DUBR-204ENST00000490441 WDR20Q8TBZ3 569 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 DIO2Q92813 273 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 PHF21BQ96EK2 531 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 ZNF597Q96LX8 424 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 ACSS3Q9H6R3 686 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 QPCTLQ9NXS2 382 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 SPRR3Q9UBC9 169 aa10.35□□□□□ -0.75
DUBR-204ENST00000490441 CHCHD2Q9Y6H1 151 aaPredicted RBP10.35□□□□□ -0.75
DUBR-204ENST00000490441 C15orf38-AP3S2A0A0A6YYH1 394 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 A0A0G2JNJ9 132 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 HMX2A2RU54 273 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 LRRC3CA6NJW4 275 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 GUCY1B2O75343 617 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 TRAPPC6AO75865 159 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 LRATO95237 230 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 RFPL3SP0C7P2 107 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 KRT15P19012 456 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 NT5EP21589 574 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 SSTR4P31391 388 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 MASP1P48740 699 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 TRPC1P48995 793 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 RIPPLY3P57055 190 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 RPS6KA2Q15349 733 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 NTRK2Q16620 822 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 TSNAXIP1Q2TAA8 658 aa10.34□□□□□ -0.75
DUBR-204ENST00000490441 RIPPLY2Q5TAB7 128 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms