RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 SNX6Q9UNH7 406 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 MAN2B2Q9Y2E5 1009 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 GPR52Q9Y2T5 361 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 MED16Q9Y2X0 877 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 FIS1Q9Y3D6 152 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 Q9Y3F1 56 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 CCL27Q9Y4X3 112 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 PCDHGA9Q9Y5G4 932 aaKnown RBP3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 PCDHGA6Q9Y5G7 932 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 PCDHGA2Q9Y5H1 932 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 ORC6Q9Y5N6 252 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 AP1M2Q9Y6Q5 423 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 RNF215Q9Y6U7 377 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 V9GYH0 126 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 C5orf42Q9H799 3197 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 ADAMTS9Q9P2N4 1935 aa3.29□□□□□ -1.88
CRNKL1-203ENST00000490258 CHD7Q9P2D1 2997 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 A0A096LPI6 279 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 A0A0B4J293 547 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 IQCMA0A1B0GVH7 501 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ELOVL7A1L3X0 281 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 MEIOCA2RUB1 952 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 LINC01553A4QN01 128 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 LINC00862A6NCI5 91 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 KRT87PA6NCN2 255 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ZSCAN5BA6NJL1 495 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 A8MVJ9 347 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 B4DXG7 233 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 HHLA1C9JL84 531 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 C9JVG2 144 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PTGES3LE9PB15 166 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 hCG_2039718K7EN88 272 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 M0QYT0 321 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 M0R3H8 397 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CCRL2O00421 344 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PLK4O00444 970 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CXCR6O00574 342 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PIRO00625 290 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 KIAA0355O15063 1070 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PROM1O43490 865 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 HS6ST1O60243 411 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 MITFO75030 526 aaPredicted RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 MTRF1O75570 445 aaKnown RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CREG1O75629 220 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 OR4F21O95013 312 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 MFN2O95140 757 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GJB5O95377 273 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TIMP1P01033 207 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CST1P01037 141 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 JCHAINP01591 159 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 IGLV3-25P01717 112 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC4A1P02730 911 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CXCL10P02778 98 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 HLA-DQB2P05538 268 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CDK1P06493 297 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 THP07101 528 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GALTP07902 379 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 LINC00032P0C843 101 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ODC1P11926 461 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GYPEP15421 78 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ALOX12P18054 663 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GABRB1P18505 474 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SAT1P21673 171 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 WARSP23381 471 aaKnown RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PTPN6P29350 595 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 FMO3P31513 532 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CSTF2P33240 577 aaKnown RBP eCLIP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GRK5P34947 590 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CA5AP35218 305 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GGT2P36268 569 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TALDO1P37837 337 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SLC6A9P48067 706 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 RGS6P49758 472 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CLK1P49759 484 aaKnown RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 DAPP51397 102 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PRMT2P55345 433 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 MTPNP58546 118 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 DAOAP59103 153 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 LILRA4P59901 499 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 IL5RAQ01344 420 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 DSC1Q08554 894 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 BAMBIQ13145 260 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 EIF4EBP2Q13542 120 aaPredicted RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 DGCR6Q14129 220 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 EFR3AQ14156 821 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SEMA3AQ14563 771 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 MFSD13AQ14CX5 517 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 PON2Q15165 354 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 RPS6KA2Q15349 733 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 ZNF79Q15937 498 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 UPP1Q16831 310 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TIGD6Q17RP2 521 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TBRG1Q3YBR2 411 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 TIMM50Q3ZCQ8 353 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 GLYR1Q49A26 553 aaPredicted RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 IQCCQ4KMZ1 466 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 CTXN3Q4LDR2 81 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 BCL7AQ4VC05 210 aa3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 SETMARQ53H47 684 aaPredicted RBP3.28□□□□□ -1.88
CRNKL1-203ENST00000490258 RUNDC3AQ59EK9 446 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms