RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 R3HCC1LQ7Z5L2 792 aaKnown RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 DND1Q8IYX4 353 aaKnown RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 BEST3Q8N1M1 668 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 VWA5B2Q8N398 1253 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 SLC15A4Q8N697 577 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 FNDC5Q8NAU1 212 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 SUN3Q8TAQ9 357 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 LRRC8CQ8TDW0 803 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 ZNF75CPQ92670 426 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 PPWD1Q96BP3 646 aaKnown RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 CTHRC1Q96CG8 243 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 CNRIP1Q96F85 164 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 C3orf30Q96M34 536 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 NPAS2Q99743 824 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 UTP23Q9BRU9 249 aaKnown RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 REEP4Q9H6H4 257 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 ZNF395Q9H8N7 513 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 ZBTB20Q9HC78 741 aaPredicted RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 INTS9Q9NV88 658 aaKnown RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 NOP53Q9NZM5 478 aaKnown RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 MYOTQ9UBF9 498 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 EIF3LQ9Y262 564 aaKnown RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 CFL2Q9Y281 166 aa10.3□□□□□ -0.76
CPSF7-212ENST00000489728 SMG1Q96Q15 3661 aaKnown RBP10.3□□□□□ -0.76
CPSF7-212ENST00000489728 ATP6AP2A0A1C7CYW4 349 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 WASHC1A8K0Z3 465 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 GABRR3A8MPY1 467 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 MYO1GB0I1T2 1018 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 PEX11AO75192 247 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 ATP6AP2O75787 350 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 PRPS1L1P21108 318 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 NT5EP21589 574 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 TACR1P25103 407 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 NTSP30990 170 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 CD97P48960 835 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 HLCSP50747 726 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 TUBA3CQ13748 450 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 ZNF267Q14586 743 aaPredicted RBP10.29□□□□□ -0.76
CPSF7-212ENST00000489728 NADK2Q4G0N4 442 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 HSP90B2PQ58FF3 399 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 TUBA3EQ6PEY2 450 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 DGAT2L6Q6ZPD8 337 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 RGS9BPQ6ZS82 235 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 PTRH1Q86Y79 214 aaKnown RBP10.29□□□□□ -0.76
CPSF7-212ENST00000489728 TICAM1Q8IUC6 712 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 MMP21Q8N119 569 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 ARFGAP2Q8N6H7 521 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 PIWIL2Q8TC59 973 aaKnown RBP10.29□□□□□ -0.76
CPSF7-212ENST00000489728 DYDC1Q8WWB3 177 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 UCN3Q969E3 161 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 TP53INP1Q96A56 240 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 BBS4Q96RK4 519 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 CNPPD1Q9BV87 410 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 CDCP1Q9H5V8 836 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 SLAMF7Q9NQ25 335 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 MAT2BQ9NZL9 334 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 ATP6V1HQ9UI12 483 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 ZNF639Q9UID6 485 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 EXO1Q9UQ84 846 aaKnown RBP10.29□□□□□ -0.76
CPSF7-212ENST00000489728 ERVK-19Q9WJR5 959 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 PCDHGA10Q9Y5H3 936 aa10.29□□□□□ -0.76
CPSF7-212ENST00000489728 A0A087WV62 115 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 TMEM200CA6NKL6 621 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 PLOD3O60568 738 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 PRAMEF2O60811 474 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 ITGA10O75578 1167 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 JUNP05412 331 aaKnown RBP10.28□□□□□ -0.76
CPSF7-212ENST00000489728 LBPP18428 481 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 FEN1P39748 380 aaKnown RBP10.28□□□□□ -0.76
CPSF7-212ENST00000489728 FRKP42685 505 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-212ENST00000489728 CYB561P49447 251 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 SSR4P51571 173 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 MGAT2Q10469 447 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 EBPQ15125 230 aaKnown RBP10.28□□□□□ -0.76
CPSF7-212ENST00000489728 ZNF628Q5EBL2 1059 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 OPN5Q6U736 354 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 CAMKMTQ7Z624 323 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 C9orf40Q8IXQ3 194 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 ZNF615Q8N8J6 731 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 Q8NA96 180 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 TMEM178AQ8NBL3 297 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 MDS2Q8NDY4 140 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 ZFP28Q8NHY6 868 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 CDC26Q8NHZ8 85 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 SLC22A8Q8TCC7 542 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 STON2Q8WXE9 905 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 EXOSC8Q96B26 276 aaKnown RBP10.28□□□□□ -0.76
CPSF7-212ENST00000489728 PPCDCQ96CD2 204 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 ZBED6CLQ96FA7 236 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-212ENST00000489728 MAELQ96JY0 434 aaKnown RBP10.28□□□□□ -0.76
CPSF7-212ENST00000489728 EGLN2Q96KS0 407 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 TSSK3Q96PN8 268 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 PRPF18Q99633 342 aaKnown RBP10.28□□□□□ -0.76
CPSF7-212ENST00000489728 NUF2Q9BZD4 464 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 WWTR1Q9GZV5 400 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.28□□□□□ -0.763e-18■□□□□ 10.2
CPSF7-212ENST00000489728 AKTIPQ9H8T0 292 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 ACSS1Q9NUB1 689 aaPredicted RBP10.28□□□□□ -0.76
CPSF7-212ENST00000489728 ATAD3AQ9NVI7 634 aa10.28□□□□□ -0.76
CPSF7-212ENST00000489728 PNPOQ9NVS9 261 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms