RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PTGFRNQ9P2B2 879 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 ACSL6Q9UKU0 697 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 SNX8Q9Y5X2 465 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 MAU2Q9Y6X3 613 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 NINQ8N4C6 2090 aa13.28□□□□□ -0.28
VPS26A-205ENST00000489656 SPEGQ15772 3267 aa13.27□□□□□ -0.28
VPS26A-205ENST00000489656 FAM186AA6NE01 2351 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 A0A087WV62 115 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 AQP12BA6NM10 295 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 TGFBR3LH3BV60 316 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 ARPC2O15144 300 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 PLOD3O60568 738 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 CPNE3O75131 537 aaKnown RBP13.27□□□□□ -0.29
VPS26A-205ENST00000489656 TNFRSF21O75509 655 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 BMP10O95393 424 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 NTRK1P04629 796 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 CCL4P13236 92 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 GGT1P19440 569 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 CSRP1P21291 193 aaKnown RBP13.27□□□□□ -0.29
VPS26A-205ENST00000489656 MAPK10P53779 464 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 RAB15P59190 212 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 RBBP4Q09028 425 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 MGAT2Q10469 447 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 EIF3IQ13347 325 aaKnown RBP13.27□□□□□ -0.29
VPS26A-205ENST00000489656 COL9A2Q14055 689 aaPredicted RBP13.27□□□□□ -0.29
VPS26A-205ENST00000489656 SERTAD2Q14140 314 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 ADRM1Q16186 407 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 CYP51A1Q16850 503 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 PRICKLE4Q2TBC4 344 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 SPDYE7PQ495Y7 208 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 MTX3Q5HYI7 312 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.27□□□□□ -0.29
VPS26A-205ENST00000489656 CEACAM20Q6UY09 585 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 COX15Q7KZN9 410 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 RNF130Q86XS8 419 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 PTOV1Q86YD1 416 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 AQP12AQ8IXF9 295 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 ZZZ3Q8IYH5 903 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 CACTIN-AS1Q8N1I8 211 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 SLC38A9Q8NBW4 561 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 OR5AK3PQ8NH89 298 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 MIPOL1Q8TD10 442 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 CTHRC1Q96CG8 243 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 DEPDC7Q96QD5 511 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 TRIM15Q9C019 465 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 TMEM38AQ9H6F2 299 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 ZCCHC3Q9NUD5 404 aaKnown RBP13.27□□□□□ -0.29
VPS26A-205ENST00000489656 TRPC4Q9UBN4 977 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 USP22Q9UPT9 525 aa13.27□□□□□ -0.29
VPS26A-205ENST00000489656 RIF1Q5UIP0 2472 aaKnown RBP13.27□□□□□ -0.29
VPS26A-205ENST00000489656 IGKV3D-11A0A0A0MRZ8 115 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 TCRBV3S1A0A5B6 114 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 FKBP6O75344 327 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 CSO75390 466 aaKnown RBP13.26□□□□□ -0.29
VPS26A-205ENST00000489656 MT-CO3P00414 261 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 C8BP07358 591 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 ATP6V1B2P21281 511 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 SOX18P35713 384 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 MC3RP41968 323 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 STT3AP46977 705 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 DCDP81605 110 aaKnown RBP13.26□□□□□ -0.29
VPS26A-205ENST00000489656 RHAGQ02094 409 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 ID2Q02363 134 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 STX4Q12846 297 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 MAP4K2Q12851 820 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 SLC13A2Q13183 592 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 VEZF1Q14119 521 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 MAP7Q14244 749 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 LTB4RQ15722 352 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 VMACQ2NL98 169 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 NKAIN1Q4KMZ8 207 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 SDK2Q58EX2 2172 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 COX20Q5RI15 118 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 FHL5Q5TD97 284 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 C1orf189Q5VU69 101 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 AAGABQ6PD74 315 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 TMEM107Q6UX40 140 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 OR2L13Q8N349 312 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 BHLHE22Q8NFJ8 381 aaPredicted RBP13.26□□□□□ -0.29
VPS26A-205ENST00000489656 PNPT1Q8TCS8 783 aaKnown RBP13.26□□□□□ -0.29
VPS26A-205ENST00000489656 FKBP10Q96AY3 582 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 CLIP3Q96DZ5 547 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 DUS3LQ96G46 650 aaKnown RBP13.26□□□□□ -0.29
VPS26A-205ENST00000489656 SLC35G5Q96KT7 338 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 ZPBPQ9BS86 351 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 RBCK1Q9BYM8 510 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 RASSF4Q9H2L5 321 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 GORASP2Q9H8Y8 452 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 SLC22A11Q9NSA0 550 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 C14orf105Q9NVL8 296 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 THUMPD1Q9NXG2 353 aaKnown RBP13.26□□□□□ -0.29
VPS26A-205ENST00000489656 SLC39A1Q9NY26 324 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 MAT2BQ9NZL9 334 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 EGFL7Q9UHF1 273 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 C19orf53Q9UNZ5 99 aaPredicted RBP13.26□□□□□ -0.29
VPS26A-205ENST00000489656 LOXL2Q9Y4K0 774 aa13.26□□□□□ -0.29
VPS26A-205ENST00000489656 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.25□□□□□ -0.29
VPS26A-205ENST00000489656 CCDC187A0A096LP49 1063 aa13.25□□□□□ -0.29
VPS26A-205ENST00000489656 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.25□□□□□ -0.29
VPS26A-205ENST00000489656 UPK1AO00322 258 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms