RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SH3GL2Q99962 352 aa10.79□□□□□ -0.68
ACTN4-206ENST00000489451 CXXC4Q9H2H0 198 aa10.79□□□□□ -0.68
ACTN4-206ENST00000489451 UBQLN3Q9H347 655 aa10.79□□□□□ -0.68
ACTN4-206ENST00000489451 GSX1Q9H4S2 264 aaPredicted RBP10.79□□□□□ -0.68
ACTN4-206ENST00000489451 LDAHQ9H6V9 325 aa10.79□□□□□ -0.68
ACTN4-206ENST00000489451 DDX31Q9H8H2 851 aaKnown RBP10.79□□□□□ -0.68
ACTN4-206ENST00000489451 ZFP64Q9NPA5 681 aa10.79□□□□□ -0.68
ACTN4-206ENST00000489451 ACKR4Q9NPB9 350 aa10.79□□□□□ -0.68
ACTN4-206ENST00000489451 TEX10Q9NXF1 929 aaPredicted RBP10.79□□□□□ -0.68
ACTN4-206ENST00000489451 MS4A12Q9NXJ0 267 aa10.79□□□□□ -0.68
ACTN4-206ENST00000489451 PHF11Q9UIL8 331 aa10.79□□□□□ -0.68
ACTN4-206ENST00000489451 IKBKGQ9Y6K9 419 aa10.79□□□□□ -0.68
ACTN4-206ENST00000489451 SPACA6W5XKT8 324 aa10.79□□□□□ -0.68
ACTN4-206ENST00000489451 MAP1AP78559 2803 aaPredicted RBP10.79□□□□□ -0.68
ACTN4-206ENST00000489451 H0YIV9 168 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 PGRMC2O15173 223 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 SIX3O95343 332 aaPredicted RBP10.78□□□□□ -0.68
ACTN4-206ENST00000489451 GPR75O95800 540 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 C2P06681 752 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 COX7A2P14406 83 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 EPB42P16452 691 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 SERPINB1P30740 379 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 PIK3CGP48736 1102 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 TRPC1P48995 793 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 NEK2P51955 445 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 KCNJ2P63252 427 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 CRYZQ08257 329 aaKnown RBP10.78□□□□□ -0.68
ACTN4-206ENST00000489451 ZNF267Q14586 743 aaPredicted RBP10.78□□□□□ -0.68
ACTN4-206ENST00000489451 PFKFB4Q16877 469 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 ACSF3Q4G176 576 aaPredicted RBP10.78□□□□□ -0.68
ACTN4-206ENST00000489451 LIPJQ5W064 366 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 CES4AQ5XG92 561 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 DESI1Q6ICB0 168 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 RNF111Q6ZNA4 994 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 GOLGA7Q7Z5G4 137 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 WDR53Q7Z5U6 358 aaPredicted RBP10.78□□□□□ -0.68
ACTN4-206ENST00000489451 IFT20Q8IY31 132 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 CLYBLQ8N0X4 340 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 PLD6Q8N2A8 252 aaKnown RBP10.78□□□□□ -0.68
ACTN4-206ENST00000489451 ZNF615Q8N8J6 731 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 NOA1Q8NC60 698 aaKnown RBP10.78□□□□□ -0.68
ACTN4-206ENST00000489451 FAM13CQ8NE31 585 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 TNIP2Q8NFZ5 429 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 RHEBL1Q8TAI7 183 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 ADIPOR1Q96A54 375 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 RBM18Q96H35 190 aaKnown RBP10.78□□□□□ -0.68
ACTN4-206ENST00000489451 GPATCH1Q9BRR8 931 aaKnown RBP10.78□□□□□ -0.68
ACTN4-206ENST00000489451 NMRAL1Q9HBL8 299 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 ALKBH4Q9NXW9 302 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 CRIM1Q9NZV1 1036 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 DTX4Q9Y2E6 619 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 ACOT9Q9Y305 439 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 RNF11Q9Y3C5 154 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 DOCK7Q96N67 2140 aa10.78□□□□□ -0.68
ACTN4-206ENST00000489451 OR7A17O14581 309 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 ALDOAP04075 364 aaKnown RBP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 FAM58BPP0C7Q3 252 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 NR2F6P10588 404 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 S1PR1P21453 382 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 CEACAM8P31997 349 aaPredicted RBP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 RAP1GDS1P52306 607 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 ZNF136P52737 540 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 ARFIP1P53367 373 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 FBXW4P57775 412 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 DUSP8Q13202 625 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 PCBP2Q15366 365 aaKnown RBP eCLIP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 UAP1Q16222 522 aaPredicted RBP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 CPSF6Q16630 551 aaKnown RBP eCLIP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 FAM83EQ2M2I3 478 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 SLC25A35Q3KQZ1 300 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 DCST1Q5T197 706 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 ARSKQ6UWY0 536 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 MYLK4Q86YV6 388 aaPredicted RBP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 L3MBTL4Q8NA19 623 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 OR52B6Q8NGF0 335 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 SPPL2AQ8TCT8 520 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 RIT1Q92963 219 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 MRRFQ96E11 262 aaKnown RBP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 ART5Q96L15 291 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 CDK15Q96Q40 435 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 DOHHQ9BU89 302 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 CXorf21Q9HAI6 301 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 ZBTB26Q9HCK0 441 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 SNX15Q9NRS6 342 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 CCM2LQ9NUG4 571 aaPredicted RBP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 QPCTLQ9NXS2 382 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 DNAJB12Q9NXW2 375 aaKnown RBP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 CNIH4Q9P003 139 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 ADGRE2Q9UHX3 823 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 BOKQ9UMX3 212 aaPredicted RBP10.77□□□□□ -0.69
ACTN4-206ENST00000489451 PCDHGB3Q9Y5G1 929 aa10.77□□□□□ -0.69
ACTN4-206ENST00000489451 RTTNQ86VV8 2226 aa10.76□□□□□ -0.69
ACTN4-206ENST00000489451 A0A087X1B8 175 aa10.76□□□□□ -0.69
ACTN4-206ENST00000489451 IQANK1A0A1B0GTG1 560 aa10.76□□□□□ -0.69
ACTN4-206ENST00000489451 CCDC189A1A4V9 331 aa10.76□□□□□ -0.69
ACTN4-206ENST00000489451 ANKRD33BA6NCL7 494 aa10.76□□□□□ -0.69
ACTN4-206ENST00000489451 OR6C76A6NM76 312 aa10.76□□□□□ -0.69
ACTN4-206ENST00000489451 SYCE1LA8MT33 242 aa10.76□□□□□ -0.69
ACTN4-206ENST00000489451 OR10H2O60403 315 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms