RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 JMJD8Q96S16 334 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 PIMREGQ9BSJ6 248 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 PRR14Q9BWN1 585 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 METTL17Q9H7H0 456 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-233ENST00000489352 MOCS1Q9NZB8 636 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 GALPQ9UBC7 116 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 HEY2Q9UBP5 337 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 DTX4Q9Y2E6 619 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 CRYL1Q9Y2S2 319 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 GPR52Q9Y2T5 361 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 WBP11Q9Y2W2 641 aaKnown RBP10.36□□□□□ -0.75
HDAC6-233ENST00000489352 EMC9Q9Y3B6 208 aa10.36□□□□□ -0.75
HDAC6-233ENST00000489352 EXPH5Q8NEV8 1989 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 PSTPIP1O43586 416 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 HCRTR2O43614 444 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 CBR3O75828 277 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 SERPINA6P08185 405 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 MPC1LP0DKB6 136 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 KRT15P19012 456 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 DEKP35659 375 aaKnown RBP10.35□□□□□ -0.75
HDAC6-233ENST00000489352 SCTRP47872 440 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 LIMS1P48059 325 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 LHX2P50458 406 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 NEK2P51955 445 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 NRG3P56975 720 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 EEFSECP57772 596 aaKnown RBP10.35□□□□□ -0.75
HDAC6-233ENST00000489352 LGALS3BPQ08380 585 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 CUL1Q13616 776 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 DOC2AQ14183 400 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 FBLN7Q53RD9 439 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 MRNIPQ6NTE8 343 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 CASC4Q6P4E1 433 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 BEND4Q6ZU67 534 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 BBS12Q6ZW61 710 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 STK32CQ86UX6 486 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 KLHDC8BQ8IXV7 354 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 UBQLNLQ8IYU4 475 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 KCTD4Q8WVF5 259 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 CCT6BQ92526 530 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 PEX13Q92968 403 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 GAL3ST3Q96A11 431 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 SNF8Q96H20 258 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 RBM18Q96H35 190 aaKnown RBP10.35□□□□□ -0.75
HDAC6-233ENST00000489352 SFXN2Q96NB2 322 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 PACSIN1Q9BY11 444 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 OR10A4Q9H209 315 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 COPS7BQ9H9Q2 264 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-233ENST00000489352 TAS2R10Q9NYW0 307 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 WWOXQ9NZC7 414 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 PCDHB10Q9UN67 800 aa10.35□□□□□ -0.75
HDAC6-233ENST00000489352 ESYT3A0FGR9 886 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 ERI3O43414 337 aaKnown RBP10.34□□□□□ -0.75
HDAC6-233ENST00000489352 METTL18O95568 372 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 PLGP00747 810 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-233ENST00000489352 HIST1H2AGP0C0S8 130 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-233ENST00000489352 BMP4P12644 408 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 ENO3P13929 434 aaPredicted RBP10.34□□□□□ -0.75
HDAC6-233ENST00000489352 ZNF708P17019 499 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 HIST1H2ADP20671 130 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 COMTP21964 271 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 PCMT1P22061 227 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 PDLIM4P50479 330 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 CTBP2P56545 445 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 ID2Q02363 134 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 BSPH1Q075Z2 132 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 FOXL1Q12952 345 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 HLA-DQA1Q5Y7H0 255 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 TMEM64Q6YI46 380 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 RNF111Q6ZNA4 994 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 RINLQ6ZS11 566 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 FAM214BQ7L5A3 538 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 STEAP2Q8NFT2 490 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 HIST1H2AHQ96KK5 128 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 HIST1H2AJQ99878 128 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 FAM118BQ9BPY3 351 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 AIF1LQ9BQI0 150 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 H2AFJQ9BTM1 129 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 TRIM2Q9C040 744 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 WWTR1Q9GZV5 400 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 NUP62CLQ9H1M0 184 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 SERHLQ9NQF3 203 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.34□□□□□ -0.75
HDAC6-233ENST00000489352 TCAF1Q9Y4C2 921 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 SPACA6W5XKT8 324 aa10.34□□□□□ -0.75
HDAC6-233ENST00000489352 GOLGA6L9A6NEM1 432 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 C4orf51C9J302 202 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 CYR61O00622 381 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 TMEM253P0C7T8 217 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 HPDP32754 393 aaPredicted RBP10.33□□□□□ -0.76
HDAC6-233ENST00000489352 CDH11P55287 796 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 LIM2P55344 173 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 GFRA1P56159 465 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 CLDN18P56856 261 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 C21orf58P58505 322 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 CARTPTQ16568 116 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 PPP4R4Q6NUP7 873 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 APTXQ7Z2E3 356 aaKnown RBP10.33□□□□□ -0.76
HDAC6-233ENST00000489352 RHOT2Q8IXI1 618 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 KLHDC8AQ8IYD2 350 aa10.33□□□□□ -0.76
HDAC6-233ENST00000489352 ANKRD53Q8N9V6 530 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms