RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 FAM57AQ8TBR7 257 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 EPS8L3Q8TE67 593 aaKnown RBP12.93□□□□□ -0.34
VTI1A-206ENST00000489142 TM4SF18Q96CE8 201 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 SPACA9Q96E40 222 aaPredicted RBP12.93□□□□□ -0.34
VTI1A-206ENST00000489142 ZNF382Q96SR6 550 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 FAM173AQ9BQD7 235 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 TIMM22Q9Y584 194 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 PCDHA9Q9Y5H5 950 aa12.93□□□□□ -0.34
VTI1A-206ENST00000489142 FREM3P0C091 2139 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 ATP6AP2A0A1C7CYW4 349 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 ACOT7O00154 380 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 ERAL1O75616 437 aaKnown RBP12.92□□□□□ -0.34
VTI1A-206ENST00000489142 ATP6AP2O75787 350 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 GLSO94925 669 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-206ENST00000489142 CPMP14384 443 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 HMOX2P30519 316 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 HMGCS1Q01581 520 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 FOXO1Q12778 655 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 ART3Q13508 389 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 NNATQ16517 81 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 C10orf62Q5T681 223 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-206ENST00000489142 FAM111BQ6SJ93 734 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 BNC2Q6ZN30 1099 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-206ENST00000489142 SLC22A16Q86VW1 577 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 PRR22Q8IZ63 422 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 MARVELD2Q8N4S9 558 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 TMEM251Q8N6I4 163 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 SIMC1Q8NDZ2 872 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 C7orf57Q8NEG2 295 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 ADCY4Q8NFM4 1077 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 OR5M9Q8NGP3 310 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 METTL6Q8TCB7 284 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 ACMSDQ8TDX5 336 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 KLHL29Q96CT2 875 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 L3HYPDHQ96EM0 354 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 SGCZQ96LD1 299 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 JSRP1Q96MG2 331 aaPredicted RBP12.92□□□□□ -0.34
VTI1A-206ENST00000489142 ACPTQ9BZG2 426 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 BRINP2Q9C0B6 783 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 GSTO2Q9H4Y5 243 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 BRF2Q9HAW0 419 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 SH2D2AQ9NP31 389 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 PLSCR2Q9NRY7 297 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.92□□□□□ -0.349e-7■■■■□ 22.5
VTI1A-206ENST00000489142 HEY2Q9UBP5 337 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 FETUBQ9UGM5 382 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 CES1P1Q9UKY3 287 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 ENTPD4Q9Y227 616 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 DTX4Q9Y2E6 619 aa12.92□□□□□ -0.34
VTI1A-206ENST00000489142 C2orf92A0A1B0GVN3 265 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 NPIPA2E9PIF3 369 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 NPIPA3F8WFD2 350 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 G3V2L1 256 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 C19orf84I3L1E1 186 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 UBFD1O14562 309 aaKnown RBP12.91□□□□□ -0.34
VTI1A-206ENST00000489142 ESRRBO95718 433 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 KRT6AP02538 564 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 KRT6BP04259 564 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 GSTA1P08263 222 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 FBXO45P0C2W1 286 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 RFPL3SP0C7P2 107 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 MYL2P10916 166 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 PORP16435 677 aaPredicted RBP12.91□□□□□ -0.34
VTI1A-206ENST00000489142 GALNSP34059 522 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 DEKP35659 375 aaKnown RBP12.91□□□□□ -0.34
VTI1A-206ENST00000489142 KRT6CP48668 564 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 SMSP52788 366 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 FOXA1P55317 472 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 FBXW4P57775 412 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 KCNJ2P63252 427 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 RAE1P78406 368 aaKnown RBP12.91□□□□□ -0.34
VTI1A-206ENST00000489142 BTKQ06187 659 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 LCP2Q13094 533 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 EXOSC7Q15024 291 aaKnown RBP12.91□□□□□ -0.34
VTI1A-206ENST00000489142 LTB4RQ15722 352 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 C6orf163Q5TEZ5 329 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 SLC22A10Q63ZE4 541 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 BICRALQ6AI39 1079 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 SLC48A1Q6P1K1 146 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 LCA5Q86VQ0 697 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 SLC22A9Q8IVM8 553 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 ZNF615Q8N8J6 731 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 ZNF441Q8N8Z8 693 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 MYRIPQ8NFW9 859 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 APIPQ96GX9 242 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 DMRTA2Q96SC8 542 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 EBPLQ9BY08 206 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 OR10A5Q9H207 317 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 ZDHHC11Q9H8X9 412 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 IL1RL2Q9HB29 575 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 PROK2Q9HC23 129 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 VPS29Q9UBQ0 182 aa12.91□□□□□ -0.34
VTI1A-206ENST00000489142 CHCHD2Q9Y6H1 151 aaPredicted RBP12.91□□□□□ -0.34
VTI1A-206ENST00000489142 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.91□□□□□ -0.34
VTI1A-206ENST00000489142 PHF3Q92576 2039 aaKnown RBP12.9□□□□□ -0.34
VTI1A-206ENST00000489142 C1orf226A1L170 272 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 OR6C76A6NM76 312 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 E9PLN8 166 aa12.9□□□□□ -0.34
VTI1A-206ENST00000489142 HNRNPRO43390 633 aaKnown RBP12.9□□□□□ -0.34
VTI1A-206ENST00000489142 PCDH7O60245 1069 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms