RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 VPS11Q9H270 941 aa14.59□□□□□ -0.07
ERGIC3-217ENST00000488935 NOL11Q9H8H0 719 aaKnown RBP14.59□□□□□ -0.07
ERGIC3-217ENST00000488935 CRIM1Q9NZV1 1036 aa14.59□□□□□ -0.07
ERGIC3-217ENST00000488935 BOKQ9UMX3 212 aaPredicted RBP14.59□□□□□ -0.07
ERGIC3-217ENST00000488935 EXPH5Q8NEV8 1989 aa14.59□□□□□ -0.07
ERGIC3-217ENST00000488935 A0A096LPK6 155 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 OR7A17O14581 309 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 GNB5O14775 395 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 DYRK3O43781 588 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 HCN1O60741 890 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 GSTA2P09210 222 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 PTX3P26022 381 aaPredicted RBP14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 SERPINB3P29508 390 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 PIK3CBP42338 1070 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 EIPR1Q53HC9 387 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 DCST1Q5T197 706 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 LIPJQ5W064 366 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 LRRC25Q8N386 305 aaPredicted RBP14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 NEIL3Q8TAT5 605 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 WDR20Q8TBZ3 569 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 PHF21BQ96EK2 531 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 GNRHR2Q96P88 292 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 POLDIP3Q9BY77 421 aaKnown RBP14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 EPB41L4BQ9H329 900 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 MS4A12Q9NXJ0 267 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 RNF14Q9UBS8 474 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 DTX4Q9Y2E6 619 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 PLEKHA6Q9Y2H5 1048 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 UTP11Q9Y3A2 253 aaKnown RBP14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 PCDHGA11Q9Y5H2 935 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 ABCA4P78363 2273 aa14.58□□□□□ -0.08
ERGIC3-217ENST00000488935 ACANP16112 2415 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 VPS13CQ709C8 3753 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 A0A1B0GTL3 188 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 C2orf92A0A1B0GVN3 265 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 SYNDIG1LA6NDD5 238 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 TRIM3O75382 744 aaPredicted RBP14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 NME6O75414 186 aaPredicted RBP14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 CTAG2O75638 210 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 KLK1P06870 262 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 TSPAN8P19075 237 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 STX2P32856 288 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 GUCY2DQ02846 1103 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 PCDH1Q08174 1060 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 TOMM20Q15388 145 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 CEBPEQ15744 281 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 NTRK2Q16620 822 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 RIPPLY2Q5TAB7 128 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 FNDC7Q5VTL7 733 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 FAM111BQ6SJ93 734 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 SLC15A4Q8N697 577 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 PTGR2Q8N8N7 351 aaPredicted RBP14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 ZNF441Q8N8Z8 693 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 ATP6V1E2Q96A05 226 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 ART5Q96L15 291 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 RILPQ96NA2 401 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 CENPKQ9BS16 269 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 MRPL1Q9BYD6 325 aaKnown RBP14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 DDX31Q9H8H2 851 aaKnown RBP14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 CXorf21Q9HAI6 301 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 LYARQ9NX58 379 aaKnown RBP14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 EHD3Q9NZN3 535 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 ADGRE2Q9UHX3 823 aa14.57□□□□□ -0.08
ERGIC3-217ENST00000488935 DOCK7Q96N67 2140 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 A0A087X1B8 175 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 H0YIV9 168 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 PPP6CO00743 305 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 ALDOAP04075 364 aaKnown RBP14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 SLC35E2P0CK97 266 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 NT5EP21589 574 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 SERPINB1P30740 379 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 KIR2DL3P43628 341 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 ALDH18A1P54886 795 aaKnown RBP14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 DUSP2Q05923 314 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 PCBP2Q15366 365 aaKnown RBP eCLIP14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 FAM83EQ2M2I3 478 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 SPRED3Q2MJR0 410 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 WIPI1Q5MNZ9 446 aaPredicted RBP14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 TMEM198Q66K66 360 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 YRDCQ86U90 279 aaKnown RBP14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 TIMP4Q99727 224 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 ACKR4Q9NPB9 350 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 FARSBQ9NSD9 589 aaKnown RBP14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 CNIH4Q9P003 139 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 CAMK2AQ9UQM7 478 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 NPFFR2Q9Y5X5 522 aa14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 MAP1AP78559 2803 aaPredicted RBP14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 HRNRQ86YZ3 2850 aaPredicted RBP14.56□□□□□ -0.08
ERGIC3-217ENST00000488935 SYCE1LA8MT33 242 aa14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 KLHL2O95198 593 aa14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 GABRA1P14867 456 aa14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 PIK3R1P27986 724 aa14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 TYK2P29597 1187 aa14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 CASQ1P31415 396 aa14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 FEN1P39748 380 aaKnown RBP14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 MASP1P48740 699 aa14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 XKP51811 444 aa14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 CRYZQ08257 329 aaKnown RBP14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 ILF2Q12905 390 aaKnown RBP14.55□□□□□ -0.08
ERGIC3-217ENST00000488935 EXOSC7Q15024 291 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms