RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 FOXK1P85037 733 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 KIAA0040Q15053 153 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 IGFBP7Q16270 282 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF750Q32MQ0 723 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 ATP6AP1LQ52LC2 224 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 SPINK14Q6IE38 97 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 FAM71E1Q6IPT2 247 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 FAM180AQ6UWF9 173 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 GPALPP1Q8IXQ4 340 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 TMEM178AQ8NBL3 297 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 MDS2Q8NDY4 140 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 OR2T11Q8NH01 316 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 NUBPLQ8TB37 319 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 DOK4Q8TEW6 326 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 MIB2Q96AX9 1013 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 EXOSC8Q96B26 276 aaKnown RBP13.98□□□□□ -0.17
CXCL12-207ENST00000488591 CNRIP1Q96F85 164 aaPredicted RBP13.98□□□□□ -0.17
CXCL12-207ENST00000488591 ATP6V1G3Q96LB4 118 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 SIGLEC12Q96PQ1 595 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 BRINP2Q9C0B6 783 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 LIN28AQ9H9Z2 209 aaKnown RBP13.98□□□□□ -0.17
CXCL12-207ENST00000488591 SLC35C2Q9NQQ7 365 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 RYDENQ9NUL5 291 aaKnown RBP13.98□□□□□ -0.17
CXCL12-207ENST00000488591 ERVK-11Q9UQG0 969 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 BSNQ9UPA5 3926 aa13.98□□□□□ -0.17
CXCL12-207ENST00000488591 PEX11AO75192 247 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 SKAP2O75563 359 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-207ENST00000488591 RASAL1O95294 804 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 WISP1O95388 367 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 SP1P08047 785 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 MPIP34949 423 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 ST13P50502 369 aaKnown RBP13.97□□□□□ -0.17
CXCL12-207ENST00000488591 SLC37A1P57057 533 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 WDR4P57081 412 aaKnown RBP13.97□□□□□ -0.17
CXCL12-207ENST00000488591 FUT7Q11130 342 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 MAP4K2Q12851 820 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 MPEG1Q2M385 716 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 RFTN2Q52LD8 501 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-207ENST00000488591 PRR30Q53SZ7 412 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-207ENST00000488591 HLA-DQA1Q5Y7H0 255 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 ATG16L1Q676U5 607 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 SLC25A25Q6KCM7 469 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 OPN5Q6U736 354 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 CCDC116Q8IYX3 515 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 VWA5B2Q8N398 1253 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF781Q8N8C0 355 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 FAM98AQ8NCA5 519 aaKnown RBP13.97□□□□□ -0.17
CXCL12-207ENST00000488591 OR7G1Q8NGA0 311 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 RAB3IL1Q8TBN0 382 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 SLC22A8Q8TCC7 542 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 ARL8AQ96BM9 186 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 C19orf60Q96EN9 201 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF681Q96N22 645 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 BBS4Q96RK4 519 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 GAL3ST4Q96RP7 486 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 RASL10BQ96S79 203 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 OR10A5Q9H207 317 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF395Q9H8N7 513 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-207ENST00000488591 TRIM45Q9H8W5 580 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-207ENST00000488591 KLHL1Q9NR64 748 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 ASF1BQ9NVP2 202 aa13.97□□□□□ -0.17
CXCL12-207ENST00000488591 TMEM200CA6NKL6 621 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 A8MVJ9 347 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 PYCARD-AS1I3L0S3 204 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 SLC25A12O75746 678 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 BCAS2O75934 225 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-207ENST00000488591 NEURL1O76050 574 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 CRYABP02511 175 aaKnown RBP13.96□□□□□ -0.17
CXCL12-207ENST00000488591 DDX5P17844 614 aaKnown RBP13.96□□□□□ -0.17
CXCL12-207ENST00000488591 SSTR4P31391 388 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 ASMTP46597 345 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 BST1Q10588 318 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 MAPKAPK3Q16644 382 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 PRICKLE4Q2TBC4 344 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 XKR7Q5GH72 579 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 ZNF468Q5VIY5 522 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-207ENST00000488591 CES4AQ5XG92 561 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 FAM180BQ6P0A1 224 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 C16orf47Q6ZP98 133 aaPredicted RBP13.96□□□□□ -0.17
CXCL12-207ENST00000488591 TICAM1Q8IUC6 712 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 C9orf40Q8IXQ3 194 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 CYP4Z2PQ8N1L4 340 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 SLC15A4Q8N697 577 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 BCORP1Q8N888 145 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 GALNT11Q8NCW6 608 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 DNAJB8Q8NHS0 232 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.96□□□□□ -0.17
CXCL12-207ENST00000488591 GRHL3Q8TE85 626 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 TUBGCP3Q96CW5 907 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 SCMH1Q96GD3 660 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 FCRL1Q96LA6 429 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 ACBD3Q9H3P7 528 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 TIMMDC1Q9NPL8 285 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 THAP1Q9NVV9 213 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 HPF1Q9NWY4 346 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 TAS2R7Q9NYW3 318 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 BCAP29Q9UHQ4 241 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 CFL2Q9Y281 166 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 CROCCQ5TZA2 2017 aa13.96□□□□□ -0.17
CXCL12-207ENST00000488591 C2orf92A0A1B0GVN3 265 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms