RNA–Protein interactions for RNA: ENST00000488452.5

NELFA-215, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-215	ENST00000488452	HPN	P05981	417 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	GSTA2	P09210	222 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	SLC35E2B	P0CK96	405 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	SLC35E2	P0CK97	266 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	FOSL1	P15407	271 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	CRABP2	P29373	138 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	BSG	P35613	385 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	RPS13	P62277	151 aa	Known RBP	13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	PHEX	P78562	749 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	CRYZ	Q08257	329 aa	Known RBP	13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	FOXD4	Q12950	439 aa	Predicted RBP	13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	CALCOCO2	Q13137	446 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	LIPJ	Q5W064	366 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	VASN	Q6EMK4	673 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	MRM1	Q6IN84	353 aa	Known RBP	13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	CYP20A1	Q6UW02	462 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	TBC1D1	Q86TI0	1168 aa	Predicted RBP	13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	MYLK4	Q86YV6	388 aa	Predicted RBP	13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	CTAGE3P	Q8IX95	158 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	PM20D2	Q8IYS1	436 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	TEX9	Q8N6V9	391 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	ZNF441	Q8N8Z8	693 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	MBD6	Q96DN6	1003 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	PRDM14	Q9GZV8	571 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	EPB41L4B	Q9H329	900 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	DDX31	Q9H8H2	851 aa	Known RBP	13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	WDR41	Q9HAD4	459 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	SNX15	Q9NRS6	342 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	ANGPTL3	Q9Y5C1	460 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	NIN	Q8N4C6	2090 aa		13.91	□□□□□ -0.18
NELFA-215	ENST00000488452	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFA-215	ENST00000488452		A0A0A6YYD5	115 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452		H0YIV9	168 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	EED	O75530	441 aa	Known RBP	13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	LTA4H	P09960	611 aa	Known RBP	13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	FAM58BP	P0C7Q3	252 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	CDK9	P50750	372 aa	Known RBP	13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	WNT3	P56703	355 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	FBXW4	P57775	412 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	GNG11	P61952	73 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	CUL3	Q13618	768 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	RPS6KA2	Q15349	733 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	HLA-DQA1	Q5Y7H0	255 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	TMEM64	Q6YI46	380 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	CMC1	Q7Z7K0	106 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	PACS2	Q86VP3	889 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	KIF18B	Q86Y91	864 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	SPPL2A	Q8TCT8	520 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	NXNL1	Q96CM4	212 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	REPS1	Q96D71	796 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	SECISBP2	Q96T21	854 aa	Known RBP	13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	ERP44	Q9BS26	406 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	ZNF717	Q9BY31	904 aa	Predicted RBP	13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	ANGPTL4	Q9BY76	406 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	ACTR8	Q9H981	624 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	CXorf21	Q9HAI6	301 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	DLL4	Q9NR61	685 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	PSD3	Q9NYI0	1048 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	WHRN	Q9P202	907 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	RNF14	Q9UBS8	474 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	NPFFR2	Q9Y5X5	522 aa		13.9	□□□□□ -0.18
NELFA-215	ENST00000488452	TUBAL3	A6NHL2	446 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	SYCE1L	A8MT33	242 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	TMPRSS11D	O60235	418 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	FAM155B	O75949	473 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	NR2F6	P10588	404 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	EPX	P11678	715 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	MTHFD2	P13995	350 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	TACR1	P25103	407 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	SSTR4	P31391	388 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	MASP1	P48740	699 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	ZNF136	P52737	540 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	GPX6	P59796	221 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	ADAM8	P78325	824 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	RPP38	P78345	283 aa	Known RBP	13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	MRPS25	P82663	173 aa	Known RBP	13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	SLMAP	Q14BN4	828 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	KBTBD12	Q3ZCT8	623 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	NHSL2	Q5HYW2	709 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	FBXW10	Q5XX13	1052 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	NSUN5P2	Q63ZY6	315 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	BICRAL	Q6AI39	1079 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	PPM1N	Q8N819	430 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	UCN3	Q969E3	161 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	HSPBAP1	Q96EW2	488 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	RILP	Q96NA2	401 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	GNRHR2	Q96P88	292 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	NAPG	Q99747	312 aa	Predicted RBP	13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	DPH5	Q9H2P9	285 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	UBQLN3	Q9H347	655 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	GSX1	Q9H4S2	264 aa	Predicted RBP	13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	CAMK2A	Q9UQM7	478 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	C15orf41	Q9Y2V0	281 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	ACOT9	Q9Y305	439 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	SLC6A5	Q9Y345	797 aa		13.89	□□□□□ -0.19
NELFA-215	ENST00000488452	FAM187A	A6NFU0	413 aa		13.88	□□□□□ -0.19
NELFA-215	ENST00000488452	CD8B2	A6NJW9	211 aa		13.88	□□□□□ -0.19
NELFA-215	ENST00000488452	PGRMC2	O15173	223 aa		13.88	□□□□□ -0.19
NELFA-215	ENST00000488452	UGDH	O60701	494 aa		13.88	□□□□□ -0.19
NELFA-215	ENST00000488452	AIFM1	O95831	613 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms