RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 SCO2O43819 266 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 IDH3BO43837 385 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 SLC16A8O95907 504 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 SERPINB2P05120 415 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 ANKRD34CP0C6C1 535 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF883P0CG24 379 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TSPY4P0CV99 314 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TSPY10P0CW01 314 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TPBGLP0DKB5 382 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 KRT3P12035 628 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TCP1P17987 556 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 EIF2S2P20042 333 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 PRKACGP22612 351 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TMOD1P28289 359 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 HLA-FP30511 346 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 PCK1P35558 622 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 VHLP40337 213 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 SOX3P41225 446 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 OR3A2P47893 321 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 KCNJ1P48048 391 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 CLDN17P56750 224 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 NCALDP61601 193 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 CSNK2BP67870 215 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 ARHGAP1Q07960 439 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TEFQ10587 303 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 CETN1Q12798 172 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 RCN2Q14257 317 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 KARSQ15046 597 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 HFEQ30201 348 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 C2orf76Q3KRA6 126 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 IQCCQ4KMZ1 466 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 LIN52Q52LA3 116 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 LRRC38Q5VT99 294 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TMEM53Q6P2H8 277 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 ZCCHC12Q6PEW1 402 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 PRSS55Q6UWB4 352 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF497Q6ZNH5 498 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 Q6ZRP5 223 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 APTXQ7Z2E3 356 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TRPM8Q7Z2W7 1104 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 PRUNE1Q86TP1 453 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 RNF10Q8N5U6 811 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 AMER3Q8N944 861 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 LINC00301Q8NCQ3 95 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF540Q8NDQ6 660 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 OR5T2Q8NGG2 359 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 ZNF519Q8TB69 540 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 DNAJC9Q8WXX5 260 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 RAPGEF5Q92565 580 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 ATP6V0A1Q93050 837 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TLCD1Q96CP7 247 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 SNF8Q96H20 258 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 C8orf76Q96K31 380 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 C17orf62Q9BQA9 187 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TRIM51Q9BSJ1 452 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 MCRIP2Q9BUT9 160 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 OSBPL10Q9BXB5 764 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TDRD1Q9BXT4 1180 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 NSRP1Q9H0G5 558 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 EGLN3Q9H6Z9 239 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 RPF1Q9H9Y2 349 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 PARVBQ9HBI1 364 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 INIPQ9NRY2 104 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 TBC1D13Q9NVG8 400 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 CYP39A1Q9NYL5 469 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 HACD3Q9P035 362 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 ELF5Q9UKW6 265 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 RABL2BQ9UNT1 228 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 GPR132Q9UNW8 380 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 AGTPBP1Q9UPW5 1226 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 NSG2Q9Y328 171 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 FAM32AQ9Y421 112 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 CSNK1G3Q9Y6M4 447 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 RFX7Q2KHR2 1363 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 UGGT1Q9NYU2 1555 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 MAP3K4Q9Y6R4 1608 aa3.32□□□□□ -1.88
ECHDC1-217ENST00000488087 IFT172Q9UG01 1749 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 AGLP35573 1532 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 TOPBP1Q92547 1522 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 BCL9LQ86UU0 1499 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 SALL1Q9NSC2 1324 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 FAM25EA8MYX2 175 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 E9PBE3 544 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 H3BMM5 538 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 H3BQV1 296 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 DDX39AO00148 427 aaKnown RBP3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 SLC1A7O00341 560 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 CPLX1O14810 134 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 CYTIPO60759 359 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 PEX11AO75192 247 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 SERPINB7O75635 380 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 ZFAND5O76080 213 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 SP9P0CG40 484 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 TRIM49P0CI25 452 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 TRIM49CP0CI26 452 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 DPEP1P16444 411 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 AADACP22760 399 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 S100A5P33763 92 aa3.31□□□□□ -1.88
ECHDC1-217ENST00000488087 KHKP50053 298 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms