RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 NDST1P52848 882 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 LIMK2P53671 638 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 BNIP1Q12981 228 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 BTG3Q14201 252 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 SIX1Q15475 284 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 PRAMEF7Q5VXH5 474 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 ARMCX5Q6P1M9 558 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 EMBQ6PCB8 327 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 GPRIN3Q6ZVF9 776 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 RABEPKQ7Z6M1 372 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 LMNTD2Q8IXW0 634 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 Q8N377 158 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 SFRP1Q8N474 314 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 FAM222BQ8WU58 562 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLC13A3Q8WWT9 602 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 PNPLA2Q96AD5 504 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 GPR137Q96N19 417 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 RPP25Q9BUL9 199 aaKnown RBP3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 PUS3Q9BZE2 481 aaKnown RBP3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 TNMDQ9H2S6 317 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 DCTPP1Q9H773 170 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 NT5DC2Q9H857 520 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 SYTL2Q9HCH5 934 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 FAM212BQ9NTI7 297 aaPredicted RBP3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 NDUFA13Q9P0J0 144 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 TUBGCP4Q9UGJ1 667 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 BCAP29Q9UHQ4 241 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 ODF2LQ9ULJ1 636 aa3.05□□□□□ -1.92
HMGB1P36-201ENST00000487709 CACNA1FO60840 1977 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 CCDC69A6NI79 296 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 ZNF724A8MTY0 619 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 EPM2AB3EWF7 344 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 BCAS2O75934 225 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 IGHG1P01857 330 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 ARF4P18085 180 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 AHCYP23526 432 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 BRCC3P46736 316 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 ADARP55265 1226 aaKnown RBP3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 DSCR10P59022 87 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 IL9RQ01113 521 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 KLF5Q13887 457 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 TEX35Q5T0J7 233 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 IL23RQ5VWK5 629 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 RAB12Q6IQ22 244 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 STEAP1BQ6NZ63 245 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 GPR142Q7Z601 462 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 LUZP1Q86V48 1076 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLC47A2Q86VL8 602 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 VPS36Q86VN1 386 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 RANBP3LQ86VV4 465 aaPredicted RBP3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 P2RY8Q86VZ1 359 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 ERICH1Q86X53 443 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 PYROXD2Q8N2H3 581 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 KDM8Q8N371 416 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 POM121L12Q8N7R1 296 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 CCNYQ8ND76 341 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 TMEM185AQ8NFB2 350 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 KIAA1524Q8TCG1 905 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 NABP1Q96AH0 204 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 TSPAN18Q96SJ8 248 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 ATOH8Q96SQ7 321 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 SOSTQ9BQB4 213 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 CARD9Q9H257 536 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 SLC25A19Q9HC21 320 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 KCNMB3Q9NPA1 279 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 PAK5Q9P286 719 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 PLA2G4CQ9UP65 541 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 FBXO7Q9Y3I1 522 aa3.04□□□□□ -1.92
HMGB1P36-201ENST00000487709 NPIPA5A0A0B4J1W7 369 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 TEX48A0A1B0GUV7 120 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 CFAP73A6NFT4 308 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 NPIPA5E9PKD4 350 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 CYB561D2O14569 222 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 EI24O14681 340 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 SH2D1BO14796 132 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 MCF2LO15068 1137 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 TXNL1O43396 289 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 FRAT2O75474 233 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 MT-ATP6P00846 226 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 PGK2P07205 417 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 PROS1P07225 676 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 HOXD4P09016 255 aaPredicted RBP3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 RALAP11233 206 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 FOSL2P15408 326 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 GNSP15586 552 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 SHC1P29353 583 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 SFNP31947 248 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 ZNF131P52739 623 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 NOP14P78316 857 aaKnown RBP3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 MYBPC1Q00872 1141 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 CD300CQ08708 224 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 TMEM44Q2T9K0 475 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 HFEQ30201 348 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 CMPK2Q5EBM0 449 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 TOR1AIP1Q5JTV8 583 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 ZNF506Q5JVG8 444 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 MOB2Q70IA6 237 aa3.03□□□□□ -1.92
HMGB1P36-201ENST00000487709 RPAINQ86UA6 219 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms