RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 SSR2P43308 183 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 RPL21P46778 160 aaKnown RBP13.99□□□□□ -0.17
MCF2L-228ENST00000487354 FNTAP49354 379 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 KRTAP1-1Q07627 177 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 FRG1Q14331 258 aaKnown RBP13.99□□□□□ -0.17
MCF2L-228ENST00000487354 ZNF267Q14586 743 aaPredicted RBP13.99□□□□□ -0.17
MCF2L-228ENST00000487354 TBCCQ15814 346 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 PDK4Q16654 411 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 PRSS57Q6UWY2 283 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 RNF111Q6ZNA4 994 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 SLC29A4Q7RTT9 530 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 LUZP2Q86TE4 346 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 SNX31Q8N9S9 440 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 PDPRQ8NCN5 879 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 SRFBP1Q8NEF9 429 aaKnown RBP13.99□□□□□ -0.17
MCF2L-228ENST00000487354 ZPLD1Q8TCW7 415 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 UCN3Q969E3 161 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 TMEM41AQ96HV5 264 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 ART5Q96L15 291 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 SFXN3Q9BWM7 321 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 TEX10Q9NXF1 929 aaPredicted RBP13.99□□□□□ -0.17
MCF2L-228ENST00000487354 WWOXQ9NZC7 414 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 C6orf203Q9P0P8 240 aaPredicted RBP13.99□□□□□ -0.17
MCF2L-228ENST00000487354 TRPS1Q9UHF7 1281 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 ROS1P08922 2347 aa13.99□□□□□ -0.17
MCF2L-228ENST00000487354 CR1P17927 2039 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 OR6C76A6NM76 312 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 PLPP1O14494 284 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 SMPD2O60906 423 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 STK16O75716 305 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 LOXP28300 417 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-228ENST00000487354 SSTR4P31391 388 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 CASP3P42574 277 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 CHIT1Q13231 466 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 SLAMF1Q13291 335 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 TMEM35AQ53FP2 167 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 KHDRBS2Q5VWX1 349 aaKnown RBP13.98□□□□□ -0.17
MCF2L-228ENST00000487354 DESI1Q6ICB0 168 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 MRM1Q6IN84 353 aaKnown RBP13.98□□□□□ -0.17
MCF2L-228ENST00000487354 CAPN12Q6ZSI9 719 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 YTHDF3Q7Z739 585 aaKnown RBP13.98□□□□□ -0.17
MCF2L-228ENST00000487354 P3H2Q8IVL5 708 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 TCAIMQ8N3R3 496 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 FAM83FQ8NEG4 500 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-228ENST00000487354 IGFBPL1Q8WX77 278 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 ABTB1Q969K4 478 aaPredicted RBP13.98□□□□□ -0.17
MCF2L-228ENST00000487354 ADIPOR1Q96A54 375 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 RBM18Q96H35 190 aaKnown RBP13.98□□□□□ -0.17
MCF2L-228ENST00000487354 VPS39Q96JC1 886 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 MARK4Q96L34 752 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 OR51B5Q9H339 312 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 POPDC3Q9HBV1 291 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 RYDENQ9NUL5 291 aaKnown RBP13.98□□□□□ -0.17
MCF2L-228ENST00000487354 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.98□□□□□ -0.17
MCF2L-228ENST00000487354 CLCF1Q9UBD9 225 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 FETUBQ9UGM5 382 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 PTBP2Q9UKA9 531 aaKnown RBP13.98□□□□□ -0.17
MCF2L-228ENST00000487354 WIF1Q9Y5W5 379 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 SPACA6W5XKT8 324 aa13.98□□□□□ -0.17
MCF2L-228ENST00000487354 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 IQANK1A0A1B0GTG1 560 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 A8MXE2 369 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 TP73O15350 636 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 ERN1O75460 977 aaKnown RBP13.97□□□□□ -0.17
MCF2L-228ENST00000487354 TNFSF13O75888 250 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 RCBTB2O95199 551 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 SNX4O95219 450 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 CT62P0C5K7 136 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 CCKARP32238 428 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 GMPRP36959 345 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 PTGDSP41222 190 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 LAPTM5Q13571 262 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 SF3B4Q15427 424 aaKnown RBP eCLIP13.97□□□□□ -0.17
MCF2L-228ENST00000487354 AP5B1Q2VPB7 878 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 CDKL4Q5MAI5 379 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 DEPDC1Q5TB30 811 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 TIGD3Q6B0B8 471 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 OR4C11Q6IEV9 310 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 YRDCQ86U90 279 aaKnown RBP13.97□□□□□ -0.17
MCF2L-228ENST00000487354 GPR180Q86V85 440 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 ZCCHC7Q8N3Z6 543 aaKnown RBP13.97□□□□□ -0.17
MCF2L-228ENST00000487354 LRRN4CLQ8ND94 238 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 OR7G3Q8NG95 312 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 TANKQ92844 425 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 UCN2Q96RP3 112 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 SECISBP2Q96T21 854 aaKnown RBP13.97□□□□□ -0.17
MCF2L-228ENST00000487354 PIGQQ9BRB3 760 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 PHACTR1Q9C0D0 580 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 CAB39LQ9H9S4 337 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 SMYD2Q9NRG4 433 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 MOCS1Q9NZB8 636 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 DTX4Q9Y2E6 619 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 ASB4Q9Y574 426 aa13.97□□□□□ -0.17
MCF2L-228ENST00000487354 C2orf92A0A1B0GVN3 265 aa13.96□□□□□ -0.17
MCF2L-228ENST00000487354 A0A1W2PR48 441 aa13.96□□□□□ -0.17
MCF2L-228ENST00000487354 PGRMC1O00264 195 aaKnown RBP13.96□□□□□ -0.17
MCF2L-228ENST00000487354 TP53I11O14683 189 aa13.96□□□□□ -0.17
MCF2L-228ENST00000487354 GNB5O14775 395 aa13.96□□□□□ -0.17
MCF2L-228ENST00000487354 CTIFO43310 598 aaKnown RBP13.96□□□□□ -0.17
MCF2L-228ENST00000487354 TMPRSS11DO60235 418 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms