RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 LGALS12Q96DT0 336 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 CXorf36Q9H7Y0 433 aa12.56□□□□□ -0.4
HMGN1-216ENST00000486741 POM121BA6NF01 834 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 H3BSH0 61 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 HCN1O60741 890 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 FHP07954 510 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF888P0CJ79 500 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-216ENST00000486741 PCGF2P35227 344 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 SLC9A3P48764 834 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF385BQ569K4 471 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 LHFPL3Q86UP9 236 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 GALNT12Q8IXK2 581 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 ZFP41Q8N8Y5 198 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 OR6K6Q8NGW6 343 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 ZFP90Q8TF47 636 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 PRR14Q9BWN1 585 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 MCOLN1Q9GZU1 580 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 MKRN2Q9H000 416 aaKnown RBP12.55□□□□□ -0.4
HMGN1-216ENST00000486741 MYNNQ9NPC7 610 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 THAP10Q9P2Z0 257 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-216ENST00000486741 PHF11Q9UIL8 331 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 CPED1A4D0V7 1026 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 FURINP09958 794 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 THEGLP0DJG4 465 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 FAM214AQ32MH5 1076 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 OR4C6Q8NH72 309 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 MMABQ96EY8 250 aaPredicted RBP12.55□□□□□ -0.4
HMGN1-216ENST00000486741 CCDC115Q96NT0 180 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 CEP350Q5VT06 3117 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 KRBA1A5PL33 1030 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 SLC30A4O14863 429 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 EMC8O43402 210 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 REM1O75628 298 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 OR5F1O95221 314 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 IFI30P13284 250 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 CD22P20273 847 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 HOXA9P31269 272 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 CCNJQ5T5M9 372 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 MYADMQ96S97 322 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 DPYSL5Q9BPU6 564 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 WBP1LQ9NX94 342 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 CNIH4Q9P003 139 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 SH2B3Q9UQQ2 575 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 TRPM6Q9BX84 2022 aa12.55□□□□□ -0.4
HMGN1-216ENST00000486741 HNRNPA2B1P22626 353 aaKnown RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 SMSP52788 366 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 NKG7Q16617 165 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 LIPKQ5VXJ0 399 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 C18orf63Q68DL7 685 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 CSNK1A1LQ8N752 337 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 OR52P1PQ8NH57 321 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF420Q8TAQ5 688 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 FCGR1BQ92637 280 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 FGF14Q92915 247 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 C16orf58Q96GQ5 468 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 OR8D2Q9GZM6 311 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 FGF22Q9HCT0 170 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 TMEM184CQ9NVA4 438 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 APOBEC3BQ9UH17 382 aaKnown RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 C17orf113A0A1B0GUU1 675 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 PRSS38A1L453 326 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 PCP4L1A6NKN8 68 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 RIIAD1A6NNX1 92 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 BCAS1O75363 584 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 SLC25A12O75746 678 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 CDH11P55287 796 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 EMX1Q04741 257 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 KRR1Q13601 381 aaKnown RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 TOMM20Q15388 145 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 PYCR3Q53H96 274 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 ZNF433Q8N7K0 673 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 CHTF18Q8WVB6 975 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 TAMM41Q96BW9 452 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 SH3YL1Q96HL8 342 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 LRRC3BQ96PB8 259 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 TGM7Q96PF1 710 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 FAM83CQ9BQN1 747 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 TMED9Q9BVK6 235 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 NLGN3Q9NZ94 848 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 TMEM9Q9P0T7 183 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 TMPRSS11EQ9UL52 423 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 SBF1O95248 1867 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 PLPP1O14494 284 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 PRR35P0CG20 571 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 GSTM2P28161 218 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 MAGEA8P43361 318 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 TMBIM6P55061 237 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 SRP54P61011 504 aaKnown RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 ABATP80404 500 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 RPE65Q16518 533 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 LRR1Q96L50 414 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 MGLLQ99685 303 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 MGAT4BQ9UQ53 548 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 KHNYNO15037 678 aaKnown RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 DRD2P14416 443 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 MLLT3P42568 568 aaPredicted RBP12.54□□□□□ -0.4
HMGN1-216ENST00000486741 ITGA1P56199 1179 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 MVKQ03426 396 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 TUBA3CQ13748 450 aa12.54□□□□□ -0.4
HMGN1-216ENST00000486741 MICAQ29983 383 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms