RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 DMXL2Q8TDJ6 3036 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 IGF2RP11717 2491 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 MAP1BP46821 2468 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 CELSR3Q9NYQ7 3312 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 SLC9B1P1A6NJY1 282 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 GLOD5A6NK44 160 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 SAC3D1A6NKF1 404 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 TMX2-CTNND1H3BSU7 103 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 TAF4O00268 1085 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 PRKRAO75569 313 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 PRSS23O95084 383 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 ZNF682O95780 498 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 MPIP34949 423 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 MAGEA8P43361 318 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 CCT3P49368 545 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 PPM1FP49593 454 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 CDK9P50750 372 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 PDX1P52945 283 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 VSX2P58304 361 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 DSTNP60981 165 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 SCARB2Q14108 478 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 ELOAQ14241 798 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 C16orf72Q14CZ0 275 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 OR52E8Q6IFG1 317 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 BHLHB9Q6PI77 547 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 USP53Q70EK8 1073 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 C6orf120Q7Z4R8 191 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 B3GNT8Q7Z7M8 397 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 SFXN5Q8TD22 340 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 MOAP1Q96BY2 351 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 CNRIP1Q96F85 164 aaPredicted RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 ZDHHC12Q96GR4 267 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 ZNF597Q96LX8 424 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 CD180Q99467 661 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 ASPSCR1Q9BZE9 553 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 STRADBQ9C0K7 418 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 POLR1BQ9H9Y6 1135 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 ADPRHL2Q9NX46 363 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 THUMPD1Q9NXG2 353 aaKnown RBP13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 KCMF1Q9P0J7 381 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 DNAJB9Q9UBS3 223 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 EPHA6Q9UF33 1036 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 DAPP1Q9UN19 280 aa13.74□□□□□ -0.21
POLR2J3-204ENST00000486319 TLCD2A6NGC4 264 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 BRINP1O60477 761 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 CPNE6O95741 557 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 CST1P01037 141 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 MT-ND1P03886 318 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 ARAFP10398 606 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 CD1CP29017 333 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 LIM2P55344 173 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 GABREP78334 506 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 CDK6Q00534 326 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 FOLH1Q04609 750 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 RUNX2Q13950 521 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 NKG7Q16617 165 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 C3orf38Q5JPI3 329 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 NIPAL1Q6NVV3 410 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 CEACAM20Q6UY09 585 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 CCDC80Q76M96 950 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 MCATQ8IVS2 390 aaKnown RBP13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 DNAJC22Q8N4W6 341 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 KLHL6Q8WZ60 621 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 MAL2Q969L2 176 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 AHCYL2Q96HN2 611 aaKnown RBP13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 VPS50Q96JG6 964 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 NR1H4Q96RI1 486 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 MAP3K3Q99759 626 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 NPLQ9BXD5 320 aaPredicted RBP13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 CHRNA10Q9GZZ6 450 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 FAM60AQ9NP50 221 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 OAZ3Q9UMX2 235 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 SATB2Q9UPW6 733 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 ANGPT4Q9Y264 503 aa13.73□□□□□ -0.21
POLR2J3-204ENST00000486319 SCN2AQ99250 2005 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 IGHV1OR21-1A0A087WYE8 117 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 SOCS2O14508 198 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 GNGT2O14610 69 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 SUV39H1O43463 412 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 DENRO43583 198 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 GALR3O60755 368 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 IFNA14P01570 189 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 ZNF23P17027 643 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 MAGEA2P43356 314 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 ANXA11P50995 505 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 CASP9P55211 416 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 SKP1P63208 163 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 GPLD1P80108 840 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 NRF1Q16656 503 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 CLPPQ16740 277 aaPredicted RBP13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 NKAIN2Q5VXU1 208 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 FAM92BQ6ZTR7 304 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 EPHX4Q8IUS5 362 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 CCDC116Q8IYX3 515 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 CARFQ8N187 725 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 WDR36Q8NI36 951 aaKnown RBP13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 NFKBIDQ8NI38 313 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 ZNF681Q96N22 645 aa13.72□□□□□ -0.21
POLR2J3-204ENST00000486319 SLC29A1Q99808 456 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms