RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 RBBP4Q09028 425 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 RPA4Q13156 261 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 PLXDC1Q8IUK5 500 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 RNF175Q8N4F7 328 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 METTL27Q8N6F8 245 aaPredicted RBP10.51□□□□□ -0.73
HDAC6-228ENST00000486227 OR6Q1Q8NGQ2 317 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF675Q8TD23 568 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 TTYH2Q9BSA4 534 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 SERINC1Q9NRX5 453 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 LYARQ9NX58 379 aaKnown RBP10.51□□□□□ -0.73
HDAC6-228ENST00000486227 KLHL42Q9P2K6 505 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 FTSJ1Q9UET6 329 aa10.51□□□□□ -0.73
HDAC6-228ENST00000486227 E2F3O00716 465 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 MRPS14O60783 128 aaKnown RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 GGT1P19440 569 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 NUP62P37198 522 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ANKRD54Q6NXT1 300 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 SLC30A6Q6NXT4 461 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 PRSS48Q7RTY5 328 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 NUP54Q7Z3B4 507 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 OAFQ86UD1 273 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF527Q8NB42 609 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 TMIEQ8NEW7 156 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 MMABQ96EY8 250 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 C14orf119Q9NWQ9 140 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 NUMBLQ9Y6R0 609 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 PAPPA2Q9BXP8 1791 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ERP29P30040 261 aaKnown RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 HSF2Q03933 536 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ST3GAL3Q11203 375 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 SPCS2Q15005 226 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 SPRED1Q7Z699 444 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 NDNFQ8TB73 568 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF480Q8WV37 535 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 TBX5Q99593 518 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 BHLHE41Q9C0J9 482 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 MAGIXQ9H6Y5 334 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 Q9N2J8 555 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 PCDH10Q9P2E7 1040 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 CLEC4AQ9UMR7 237 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 TMEM221A6NGB7 291 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 SDC3O75056 442 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 CXCL10P02778 98 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 AHCYP23526 432 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 DPP6P42658 865 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 GMFBP60983 142 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF267Q14586 743 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 BTBD16Q32M84 506 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 KLHL22Q53GT1 634 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 METTL2BQ6P1Q9 378 aaKnown RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF367Q7RTV3 350 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 KLHDC8AQ8IYD2 350 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 MEIOBQ8N635 442 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 RHBDD1Q8TEB9 315 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 KLHL6Q8WZ60 621 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 UFD1Q92890 307 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 SLA2Q9H6Q3 261 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 MKKSQ9NPJ1 570 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 TIGARQ9NQ88 270 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 MALT1Q9UDY8 824 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 TLX2O43763 284 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 PLGP00747 810 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 IGLV3-27P01718 113 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 HEXBP07686 556 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 SLC9A3P48764 834 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ATP12AP54707 1039 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 RPS3AP61247 264 aaKnown RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 CDK3Q00526 305 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 DESI1Q6ICB0 168 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 TMEM207Q6UWW9 146 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF761Q86XN6 746 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 OR4N5Q8IXE1 308 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF433Q8N7K0 673 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ISL2Q96A47 359 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 ERMAPQ96PL5 475 aaPredicted RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 MAPKAP1Q9BPZ7 522 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 MCCC2Q9HCC0 563 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 NKIRAS2Q9NYR9 191 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 SEC14L4Q9UDX3 406 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 INTS6Q9UL03 887 aaKnown RBP10.5□□□□□ -0.73
HDAC6-228ENST00000486227 CMAHPQ9Y471 501 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 PCDHGB6Q9Y5F9 930 aa10.5□□□□□ -0.73
HDAC6-228ENST00000486227 H3BNC9 293 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 UGDHO60701 494 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 HMGN1P05114 100 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 GSTM3P21266 225 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 PROKR1Q8TCW9 393 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 TOE1Q96GM8 510 aaKnown RBP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 ELL3Q9HB65 397 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 SPIN1Q9Y657 262 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 ZNF831Q5JPB2 1677 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 ELOA3DA6NLF2 546 aaPredicted RBP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 DCDC1P59894 354 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 ENPP2Q13822 863 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 ELOA3BQ3SY89 546 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 OR4C11Q6IEV9 310 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 DCP2Q8IU60 420 aaKnown RBP10.49□□□□□ -0.73
HDAC6-228ENST00000486227 NUP43Q8NFH3 380 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 ELOA3Q8NG57 546 aa10.49□□□□□ -0.73
HDAC6-228ENST00000486227 OR6K6Q8NGW6 343 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms