RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.06■□□□□ 0.48
SNX5-213ENST00000486039 ZNF791Q3KP31 576 aaPredicted RBP18.06■□□□□ 0.48
SNX5-213ENST00000486039 EMBQ6PCB8 327 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 SLC29A4Q7RTT9 530 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 TRABD2AQ86V40 505 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 SPPL2CQ8IUH8 684 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 GALNT12Q8IXK2 581 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 GHDCQ8N2G8 530 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 GOLM1Q8NBJ4 401 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 OR2M7Q8NG81 312 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 C11orf24Q96F05 449 aaPredicted RBP18.06■□□□□ 0.48
SNX5-213ENST00000486039 SGCZQ96LD1 299 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 GAL3ST4Q96RP7 486 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 WWTR1Q9GZV5 400 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 HEY2Q9UBP5 337 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 CRYBG3Q68DQ2 2970 aa18.06■□□□□ 0.48
SNX5-213ENST00000486039 CCDC151A5D8V7 595 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 OR6C76A6NM76 312 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 G3V3Y1 287 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 TFECO14948 347 aaPredicted RBP18.05■□□□□ 0.48
SNX5-213ENST00000486039 ERAL1O75616 437 aaKnown RBP18.05■□□□□ 0.48
SNX5-213ENST00000486039 CCL3P10147 92 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 S1PR1P21453 382 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 CNR1P21554 472 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 NT5EP21589 574 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 SERPINB3P29508 390 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 PTGER1P34995 402 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 FEN1P39748 380 aaKnown RBP18.05■□□□□ 0.48
SNX5-213ENST00000486039 DUSP2Q05923 314 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 LIPMQ5VYY2 423 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 FAM180BQ6P0A1 224 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 Q6ZPB1 254 aaPredicted RBP18.05■□□□□ 0.48
SNX5-213ENST00000486039 FGD2Q7Z6J4 655 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 C10orf107Q8IVU9 208 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 SLC34A3Q8N130 599 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 RIBC1Q8N443 379 aaPredicted RBP18.05■□□□□ 0.48
SNX5-213ENST00000486039 SLC15A4Q8N697 577 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 ZNF615Q8N8J6 731 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 ZNF441Q8N8Z8 693 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 BANPQ8N9N5 519 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 OR52N2Q8NGI0 321 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 SLC22A8Q8TCC7 542 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 CAVIN3Q969G5 261 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 FAIM2Q9BWQ8 316 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 SH2D2AQ9NP31 389 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 MKS1Q9NXB0 559 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 LGALS13Q9UHV8 139 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 TINAGQ9UJW2 476 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 PLLPQ9Y342 182 aa18.05■□□□□ 0.48
SNX5-213ENST00000486039 DIDO1Q9BTC0 2240 aaKnown RBP18.04■□□□□ 0.48
SNX5-213ENST00000486039 CCL21O00585 134 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 PCDH7O60245 1069 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 IL3P08700 152 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 DEKP35659 375 aaKnown RBP18.04■□□□□ 0.48
SNX5-213ENST00000486039 SOX18P35713 384 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 ALDH9A1P49189 494 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 NR0B1P51843 470 aaKnown RBP18.04■□□□□ 0.48
SNX5-213ENST00000486039 BTKQ06187 659 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 ACSM2AQ08AH3 577 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 IFFO1Q0D2I5 559 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 MGAT2Q10469 447 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 PCLAFQ15004 111 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 ERCC6LQ2NKX8 1250 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 PRICKLE4Q2TBC4 344 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 SPIN4Q56A73 249 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 CMPK2Q5EBM0 449 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 CFAP157Q5JU67 520 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 ACSM2BQ68CK6 577 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 BNC2Q6ZN30 1099 aaPredicted RBP18.04■□□□□ 0.48
SNX5-213ENST00000486039 KLHL29Q96CT2 875 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 SPACA9Q96E40 222 aaPredicted RBP18.04■□□□□ 0.48
SNX5-213ENST00000486039 CNRIP1Q96F85 164 aaPredicted RBP18.04■□□□□ 0.48
SNX5-213ENST00000486039 CCDC120Q96HB5 630 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 APOPT1Q96IL0 206 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 MAGED4Q96JG8 741 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 ZNF681Q96N22 645 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 SHCBP1LQ9BZQ2 653 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 ROPN1BQ9BZX4 212 aaPredicted RBP18.04■□□□□ 0.48
SNX5-213ENST00000486039 OR10A5Q9H207 317 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 ROPN1Q9HAT0 212 aaPredicted RBP18.04■□□□□ 0.48
SNX5-213ENST00000486039 SACM1LQ9NTJ5 587 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 DLGAP4Q9Y2H0 992 aa18.04■□□□□ 0.48
SNX5-213ENST00000486039 C2orf92A0A1B0GVN3 265 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 GOLGA6L10A6NI86 522 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 H3BQF6 201 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 ATP1B1P05026 303 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 FBXO45P0C2W1 286 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 CSNK2A2P19784 350 aaPredicted RBP18.03■□□□□ 0.48
SNX5-213ENST00000486039 TIA1P31483 386 aaKnown RBP eCLIP18.03■□□□□ 0.48
SNX5-213ENST00000486039 DNASE1L1P49184 302 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 GALNT18Q6P9A2 607 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 FAM111BQ6SJ93 734 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 C16orf78Q8WTQ4 265 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 ADIPOR1Q96A54 375 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 FAM173AQ9BQD7 235 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 GATA5Q9BWX5 397 aaPredicted RBP18.03■□□□□ 0.48
SNX5-213ENST00000486039 EBPLQ9BY08 206 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 PARD6BQ9BYG5 372 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 TTTY12Q9BZ98 90 aa18.03■□□□□ 0.48
SNX5-213ENST00000486039 SIRT5Q9NXA8 310 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms