RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 VPS4BO75351 444 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 ITGA10O75578 1167 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 IGKV3-11P04433 115 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 NT5EP21589 574 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 FEN1P39748 380 aaKnown RBP11.56□□□□□ -0.56
HMG20B-211ENST00000486028 ST13P50502 369 aaKnown RBP11.56□□□□□ -0.56
HMG20B-211ENST00000486028 SSR4P51571 173 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 SLC18A1P54219 525 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 ABCE1P61221 599 aaKnown RBP11.56□□□□□ -0.56
HMG20B-211ENST00000486028 ERVK-8P63133 956 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 KCNC4Q03721 635 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 C2orf80Q0P641 193 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 STX3Q13277 289 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 NR6A1Q15406 480 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 INAQ16352 499 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 ZNF750Q32MQ0 723 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 ZNF766Q5HY98 468 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 SPINK14Q6IE38 97 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 FAM180AQ6UWF9 173 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 RNF111Q6ZNA4 994 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 Q6ZSR9 355 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 GALNT12Q8IXK2 581 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 GALNT11Q8NCW6 608 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 MDS2Q8NDY4 140 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 DOK4Q8TEW6 326 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 TWIST2Q8WVJ9 160 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 TMEM125Q96AQ2 219 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 TLCD1Q96CP7 247 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 C19orf60Q96EN9 201 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 SIGLEC12Q96PQ1 595 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 TRIM45Q9H8W5 580 aaPredicted RBP11.56□□□□□ -0.56
HMG20B-211ENST00000486028 LIN28AQ9H9Z2 209 aaKnown RBP11.56□□□□□ -0.56
HMG20B-211ENST00000486028 MYNNQ9NPC7 610 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 GIMAP4Q9NUV9 329 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 ASF1BQ9NVP2 202 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 NKIRAS1Q9NYS0 192 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 EHD3Q9NZN3 535 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 HEY2Q9UBP5 337 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 ZDHHC2Q9UIJ5 367 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 VPS4AQ9UN37 437 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 ERVK-19Q9WJR5 959 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.56□□□□□ -0.56
HMG20B-211ENST00000486028 POLR3HQ9Y535 204 aaPredicted RBP11.56□□□□□ -0.56
HMG20B-211ENST00000486028 PCDHGB6Q9Y5F9 930 aa11.56□□□□□ -0.56
HMG20B-211ENST00000486028 A0A1W2PS29 197 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 TMEM200CA6NKL6 621 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 OR6C76A6NM76 312 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 HRKO00198 91 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 WWP2O00308 870 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 PIP5K1BO14986 540 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 OR2J2O76002 312 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 NEURL1O76050 574 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 RASAL1O95294 804 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 ATP1B1P05026 303 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 SP1P08047 785 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 DDCP20711 480 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 ARRB2P32121 409 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 HK2P52789 917 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 MAP4K2Q12851 820 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 KIAA0040Q15053 153 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 MPEG1Q2M385 716 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 AGBL2Q5U5Z8 902 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 ZNF468Q5VIY5 522 aaPredicted RBP11.55□□□□□ -0.56
HMG20B-211ENST00000486028 SLC25A25Q6KCM7 469 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 C16orf47Q6ZP98 133 aaPredicted RBP11.55□□□□□ -0.56
HMG20B-211ENST00000486028 IKBIPQ70UQ0 350 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 SLC29A4Q7RTT9 530 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 GPALPP1Q8IXQ4 340 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 KIRREL3Q8IZU9 778 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 LRRC25Q8N386 305 aaPredicted RBP11.55□□□□□ -0.56
HMG20B-211ENST00000486028 BCORP1Q8N888 145 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 TMEM178AQ8NBL3 297 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 OR7G1Q8NGA0 311 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 OR2T11Q8NH01 316 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 CDC26Q8NHZ8 85 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 NUBPLQ8TB37 319 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 GRHL3Q8TE85 626 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 ASB15Q8WXK1 588 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 EXOSC8Q96B26 276 aaKnown RBP11.55□□□□□ -0.56
HMG20B-211ENST00000486028 PPP3R2Q96LZ3 170 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 ZNF681Q96N22 645 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 BARD1Q99728 777 aaKnown RBP11.55□□□□□ -0.56
HMG20B-211ENST00000486028 FAM107BQ9H098 131 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 MIEF1Q9NQG6 463 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 SLC35C2Q9NQQ7 365 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 KLHL1Q9NR64 748 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 TMED5Q9Y3A6 229 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 CPAMD8Q8IZJ3 1885 aa11.55□□□□□ -0.56
HMG20B-211ENST00000486028 A8MVJ9 347 aa11.54□□□□□ -0.56
HMG20B-211ENST00000486028 LSM1O15116 133 aaKnown RBP11.54□□□□□ -0.56
HMG20B-211ENST00000486028 ITM2AO43736 263 aa11.54□□□□□ -0.56
HMG20B-211ENST00000486028 LYPLA1O75608 230 aaPredicted RBP11.54□□□□□ -0.56
HMG20B-211ENST00000486028 SLC25A12O75746 678 aa11.54□□□□□ -0.56
HMG20B-211ENST00000486028 CRYABP02511 175 aaKnown RBP11.54□□□□□ -0.56
HMG20B-211ENST00000486028 BGNP21810 368 aa11.54□□□□□ -0.56
HMG20B-211ENST00000486028 MPIP34949 423 aa11.54□□□□□ -0.56
HMG20B-211ENST00000486028 SLC1A6P48664 564 aa11.54□□□□□ -0.56
HMG20B-211ENST00000486028 SLC37A1P57057 533 aa11.54□□□□□ -0.56
HMG20B-211ENST00000486028 WDR4P57081 412 aaKnown RBP11.54□□□□□ -0.56
HMG20B-211ENST00000486028 CORO7P57737 925 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms